| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3444 |
|---|
| Symbol | |
|---|
| ID | 3966248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 4382355 |
|---|
| End bp | 4382999 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637922541 |
|---|
| Product | arylesterase |
|---|
| Protein accession | YP_528911 |
|---|
| Protein GI | 90023084 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2755] Lysophospholipase L1 and related esterases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000206648 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTGA ACGGTTTCGC GCGCCACTTA GTGGTTTTAC TTGGCGTAGT GTGTTTTGTA
TACGCAACAC AGGCTCGCGC AGATCAAGCC CGCCCTACTA TTTTAATCCT AGGCGATAGC
CTAAGCGCAG CTTATAAATT GTCTGCAGAA GACGGCTGGG GGCATTTATT GGTTCAACGC
CTTGCGGCGC AAGGGTTTAA TTATGAGGTG GTAAACGCTT CAATAAGTGG TGCTACCACT
AATGCAGGCT TGCAGCGAAT GCCTGCCTTA TTAGAAAAGC ACAAACCAGA ATATGTATTG
TTAGAGCTGG GCGCAAACGA TGGCTTACAA GGCATGCCGG TAGCAGGCAT AACGCGCAAT
TTGGAATCGC TAATTAAGCA AGCACTGCAC GCCGGCGCAG AGGTAATATT ACTGGGCATT
CAGCTACCCC CCAATTTCGG CAGCCGCTAC ACCCAGCCCT TTTTTGAGCA ATACTCAAGC
TTGGCTAAAA AATATAATTT AGCGTTGGTA CCATTCCTAT TAGAAGGTGT AGCAGGTAAA
CCTGCACTCA TGCAAGCCGA CGGTTTACAC CCCACCGCAG AGGCACAACC AATAGTACTA
AACAATGTAT GGCCAGTACT TAAAGAACAA TTGAGTAAAA AATAG
|
|---|
| Protein sequence | MKLNGFARHL VVLLGVVCFV YATQARADQA RPTILILGDS LSAAYKLSAE DGWGHLLVQR
LAAQGFNYEV VNASISGATT NAGLQRMPAL LEKHKPEYVL LELGANDGLQ GMPVAGITRN
LESLIKQALH AGAEVILLGI QLPPNFGSRY TQPFFEQYSS LAKKYNLALV PFLLEGVAGK
PALMQADGLH PTAEAQPIVL NNVWPVLKEQ LSKK
|
|---|
| |