Gene Sde_3443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3443 
Symbol 
ID3966247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4381871 
End bp4382302 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content42% 
IMG OID637922540 
Producthypothetical protein 
Protein accessionYP_528910 
Protein GI90023083 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000294383 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTGGCGC TTATTCTAAA CAGTGTGCAA AACATGAAAG ACTGTAATCA GTGCGGTAAA 
TGCTGCATAA AATATGGCGA TGGGGCACTT TCTGCTACCG CCAACGAAAT AGATATGTGG
GAGCTATTTC AGCCCCATAT ATTTGAATAC GTACATAATG GTGACATTTG GGTAGACCCA
GCCACAGGCA AAAAATTAAA CCGCTGCCCA TTTTTAGAAA TCAGCCCACC AACTACGACT
ACTGCCCCAC TAAAATACAC CTGCAGTATT TATCACGATC GCCCAGAAGA CTGTAGGCAC
TACCCTACTC ATATTGAAGA AATGATAAGG GATGAGTGCG AAATGATAGA GCCGATAGAT
TTAACCAATA CTGAACGGGC GCAAACTAAG TTAGATATTA TTATGAGTGA CAGTAGGCCG
CCAAAAAGGT AA
 
Protein sequence
MVALILNSVQ NMKDCNQCGK CCIKYGDGAL SATANEIDMW ELFQPHIFEY VHNGDIWVDP 
ATGKKLNRCP FLEISPPTTT TAPLKYTCSI YHDRPEDCRH YPTHIEEMIR DECEMIEPID
LTNTERAQTK LDIIMSDSRP PKR