Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3434 |
Symbol | |
ID | 3966238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 4371101 |
End bp | 4373125 |
Gene Length | 2025 bp |
Protein Length | 674 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637922531 |
Product | oxidoreductase, FAD-binding |
Protein accession | YP_528901 |
Protein GI | 90023074 |
COG category | [C] Energy production and conversion [R] General function prediction only |
COG ID | [COG0633] Ferredoxin [COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 [COG3576] Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000581743 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAACGGT TACAACCTTC CCAGTTTCAC CAAGCAGAAA AGGCAGTACA GAAACGTTTG GGCGTGGCTG ACATGGTAGC ACAGCACAGC GAAGGGTACA TTCGCTCCAC TATGCCCGGT CAGCACCGAG ATTTCTTTAC AAATCTTCCC ATGGTGATAG TGAGCATCAC AGACTTCGAC GGCTTCCCAT GGCCTATACC ATTGCATGGA AAGCCTGGTT TTATTAAATC ACCCAATGCA AATACACTCG AAATAGAAAC CTACCCCACA CTTAAGGACG TGCTAAAACT TAACTTTAAA AAAAGTCAAA AAATAGGCAT TCTTGGAATT GAGCTGCATA CACGCCGTCG CAATCGTATG AATGGCACAA TTAAAGAGAT AAACAACAAC AGCTTCTTAG TTATATGCGA ACAAAGTTTT GGTAATTGCC CTCAATATAT CCAAAAGCGT GAGTTACACT GGGTCGATAC GCCTCAAAAG TGTTTGCAAA CAGAAGATAT TTTTTTAACG AATACACTAA CTTCGACCTG TGCAGAATGG ATTGAATCCT CAGATACATT TTTTATTAGC TCCCGAACCA AACGTCTTTC TACCGATAAA CGTGACGGCC TAGATGTTTC CCATCGAGGA GGAAAACCAG GATTCGTAAA AGTTGAAAAC GACACTTTAT ATTTCCCGGA TTTTAGTGGT AATCAGTTTT TTAATACACT TGGTAATATA CAATCTGACA GCCGAGTGGG CTTATATTTC CCCGATTATG AAAGTGGAAA AATTATACTT ATATCGGGTA CAGCTAAAAT TATCTGGGAT AAAGAATTAA CTAGAATATT TGAAGGAGCA GAACGAATTA TTTCTGTAAA GGTACGCAAT TGCCTTATTC TCGACAGTTT TCTTCCCATG CGAGGCGTGC TTACCGAGCT TTCGCCATCA CTGATACGCA CAGGCACATG GGAAAATCCT CAAGAAAAAA GCGCAGCTAG AGTATATAAG CAGTTTAAAA TAATAAAGAA GATAAAGGAA AGCCGTGACG TTACGTCGTT TTATATTAGG CCTCTAGATG GCAGCGCGTT AAGTTCTTAT CTACCAGGTC AATTTTTACC TATTAGTATC AAGCAACCCC ATACATCATC TACCTGCCTG CGAACGTACA CACTGTCACA AGCACCACTA AGCAACGCTT ATCGCTTTTC CGTTAAACGT GAAAAATTTG GCCTAGCATC TCGTATATTA CACGACACCA TTAACACCGG CGATAGTCTT TATGTAAGTC AACCCGAAGG AAAATTCACA TTACAAACCA ACAAAAAAAC AAATGTTTTA TTGTCAGCCG GTATTGGTAT TACGCCAATG ATAGCCATGC TGCAAGGGCT AATTCGAGAA GTAGAAAAAG GTGAAAAACC ACAAGATGTA TATTTTATTC ATAGCACCCA GAATTCAGAG ACACATACAT TTGCAAATGA ACTAAAACAC CTCAACAAAC GACACAAATG GCTACAACTC TACACAATTT ACTCCCAACC AAAACTGAAT GACAAACTAG GACAGCACTA TGATGTATCA GGAAGAATAT CGCTAGATCT ACTTAGAAAA ATACTTCCTA CCGATAATTT TGACGTATAT CTATGTGGTT CTGAATCTTT TATGCGCTCA AGCTATACAA ATTTAAAAGC GATGGGTATC GCTGAATCTA GAATATTTTA TGAGTTTTTC GACGACGGTT CATTTGAAAG CCATCAGCTA AACAAATTTC AAACAGCACA GCGAGCTGAA ATATATTTCG CAAAAAGTAA CATTACCGCA ACGTGGACAC CAAACGACGG TACCTTATTA CAATTTGCCG AAAAAATGGG TTTAAAACCA ATGTATAGCT GTCGCACTGG TAACTGCGGC ACTTGTAGCT GCACGCTAAG CACCGGCGAA GTAACCTACG CCAATAAACC CGGCTATACA CCAGCAAATG GTAGCGCTTT AATATGCTGC GCCCGCCCCG CACTAAACAC CACCAAGTTA ACCTTTCACA TATAA
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Protein sequence | MKRLQPSQFH QAEKAVQKRL GVADMVAQHS EGYIRSTMPG QHRDFFTNLP MVIVSITDFD GFPWPIPLHG KPGFIKSPNA NTLEIETYPT LKDVLKLNFK KSQKIGILGI ELHTRRRNRM NGTIKEINNN SFLVICEQSF GNCPQYIQKR ELHWVDTPQK CLQTEDIFLT NTLTSTCAEW IESSDTFFIS SRTKRLSTDK RDGLDVSHRG GKPGFVKVEN DTLYFPDFSG NQFFNTLGNI QSDSRVGLYF PDYESGKIIL ISGTAKIIWD KELTRIFEGA ERIISVKVRN CLILDSFLPM RGVLTELSPS LIRTGTWENP QEKSAARVYK QFKIIKKIKE SRDVTSFYIR PLDGSALSSY LPGQFLPISI KQPHTSSTCL RTYTLSQAPL SNAYRFSVKR EKFGLASRIL HDTINTGDSL YVSQPEGKFT LQTNKKTNVL LSAGIGITPM IAMLQGLIRE VEKGEKPQDV YFIHSTQNSE THTFANELKH LNKRHKWLQL YTIYSQPKLN DKLGQHYDVS GRISLDLLRK ILPTDNFDVY LCGSESFMRS SYTNLKAMGI AESRIFYEFF DDGSFESHQL NKFQTAQRAE IYFAKSNITA TWTPNDGTLL QFAEKMGLKP MYSCRTGNCG TCSCTLSTGE VTYANKPGYT PANGSALICC ARPALNTTKL TFHI
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