| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3419 |
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| Symbol | |
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| ID | 3966145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4349835 |
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| End bp | 4352783 |
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| Gene Length | 2949 bp |
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| Protein Length | 982 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637922516 |
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| Product | hypothetical protein |
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| Protein accession | YP_528886 |
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| Protein GI | 90023059 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0573665 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAACA GCCCAAAACA ACTAGCCAAA ATGCCCAAAC GATGGAAATG GCTGGGCATA
ATATTAAGCC TATACGCACT GGCGGGCTTT TTACTGGTAC CTTGGGTAAT TAGCACCACG
CTTACCGACC TAACCCAAAA GCGGTTGCAG CTAACTAGCC ACATAGAAAA AGTGCGCTTT
AACCCTTTTA CCTTCACCCT ACAAATAGAT CAGCTTGTGC TGCAGCAACC CGACGGCAGT
GAATTTGCAG GTTTTGATAA ATTAAAAGTT AACTTTCAAA CTACCAGCCT TTTTTATTGG
GCGTGGAGCT TTAAAGAAGT ACATTTACTT GGGCTACACA GCACCATAGA GCGCCAAAAC
GAAATTGACA ATACCCTAAG CACTCTCGCA CAACGCTGGC AAGCCAGCGC CGAGCAACAA
CAAACTACGG CGCCCCCGGC AAACGCCAAC GACACTTTAC CCCGCATTCG TATAAGCGAT
ATTCAGTTTT CTATAGCGCG TATAGATTTG CTAGACCAAG TACCCGCTAC ACCATTTGCA
ACCCAGCTAG GCCCTATTCA CTTTGGCGTT AGCGATTTTT CTACTCTGCC AAATAAAACC
GGTAAACAGG AATTTTCGTT CGCAACCGAG CAGGGCGCAA AACTTAGCTG GAGCGGCAAC
ATAAGCCTTG CCCCCTTGGC AAGCGAAGGC AGTGTGGCAA TAGAGGGCCC GTATTTACCG
CTTATTTCTG ACTACCTGCA AGACACGCTA AATTTTAAGA TTTTAGCAGG TGATTTTGAT
ATTGATTTTA ATTACGCCAT AGCCGAAAGC AGCAACGGAA TTAATGTAAC CATAGATAAA
ATACATGCCG GCCTTCACAA CCTAAACCTT GTTAGCGATA ACGGCGAGCC ACTGTACAAA
CTAAAAAGCC TCGCAGTAAG CAATGCGATA GTGGAGTGGC CTGCGCAGCG TGCTCATATA
CCAGATATTG CACTTAATAA CGGTGAGCTA TGGGTGAGCA AACACAGCGA CGGCATTATT
AATTTAACGC AGCTAATAAA CACTGAGCAG CCCAGCAGCG CCCCCACAGA GAAGCCAACG
CAAGCCACGA GTGAATCATC AACACCCTGG CAAGTTACCA CCCACAAAAT TAGTATTAAC
AACTGGCAGG TACAATTTAA CGACAACAGC ATTGGCTCGC CGGCATCCAT TCTTGTTGGG
CCTATCAATA TTTCGGCTAA GAATATAGGC ACACAAGCCA ATCAGCTTAT TGGTATTGAT
GCAATTTTAG GCATTACAGA AGGCTCACTC TCACTCAACA CCGAGCTGCA AATAAACCCT
GTTGCGAATA TCGCGGGCAC CTATTCAGTG GATTCCATTC CCCTACAATT AATACAGCCC
TACTTGGCCG ACTATGCGAA AGTTGAATTG CAAACAGGGC TACTTGCAAT ACAAGGTACA
CTTGAAGGCG AAACACCCAC GGCTATAACA ACCCGCGCCG ACTTGCAAAT AAGCCAGCTA
AATATAATAG AGAACGTGAC TAATACTCGC CTGCTTGGGT GGAATGAACT AAATGTAAAC
GATGTGTATG CAGCGCCACA TAATAACGAA GTAAATATCG CGAGTGTTGC GCTAAGCGAA
ATGTATGCAG ATTTTGTGAT TGCAGCAGAC AGTACAACAA CTATTGATCG CATTATGGTC
GAAGCAAAGT CTACCAATAC TGAACCAGAA TCAACCCCGT CAGCTACAGA CGAAAACTCA
GGCCCACCAA TGGCGTTAAC TATAGGTAAA ATCGAAATTT TACAAAGTGC GGGACATTTT
GCTGACCTCT CATTACCACT GCCTTTCGAT ACTCATATAA CCAAACTACA TGGCGAGCTT
TCAACGCTTG CCAGTGCAAG CACGCAACCT TCGCAACTTA GTTTAGAAGG GCAGGTGGAT
GAGTACGGTT TAATGCGTGC CAATGGCTAC TTAAGCGCAA TGGACCCCAC TAAAAATTCC
GATATAAAAT TAGTGTTTCG CAATGTGAGC GTACCCAGCT TCTCCCCCTA CTCTATTAAG
TTTGCAGGCA GAGAAGTACA AAGTGGCAAG CTCGATTTGA ATTTAGAATA CAAACTAAAC
GACGGCAAAA TGCAAGCCAA CAATAATGTT GTGCTCTACG ACTTGGCATT AGGCAAAAAA
CTCGACCAGC CGGGCGCAGT TGATTTACCC CTCGACTTGG CTCTTGCGCT ACTAAAAGAT
GGCAACGGTA AAATAGATGT CGATTTACCC ATAACTGGCG ATGTAAACGA CCCCAAATTT
GGCATTGGCA AAGTAGCAGG CCAAGCTATA ACTCGCTTAA TTACCAACAT TGTGACATCG
CCCTTTAAAT TATTAGCTAG CTTGGCAGGC TCAAGTAGCG AAGATATTGG CAATATTGCG
TTTGATGCAG GCAGCAGTAA TATTACGCCA CCGGAATTAG AAAAAATTTA CGCTTTAACC
AAAGCGCTGG CGCAACGCCC CAATTTACAG CTTAGTATTG GCGCCGCCTT CGAACCCAAG
CTAGACGGGC GAGCACTAAA AGCAAAGAAA CTCGACGCGC TACTTATTGC AGAAGCCGGT
GAAAATAGCA AAGTGCTCAC CCACCCTAAA ACACTGCGCG CATTAGAAAA CCTATATAAA
CAGTACCGGT TAGAACCGTC CCTTAACGTG CTTGAACAAA GTCACACCAA ACAATCACAA
GAGGGTAAGC AAACTGTCGA TACCTTAGCC TACGCCAACC AAATTAAAAA TAAGCTAATC
GATCAACAAC CACTAGATCA AATAGAACTA CACACACTTG CCAAAGCGCG CGCACAGGTT
ATTGAAAACG CTATTACAGA AAAAAATATT GCCATAACCA AGCAAATACA GCTGGGCGAG
TTAGAAGCCG TAAAGGCAAC CAAACAAAAA CAAATTATTA CCGAGTTAGA AATTAACGTA
AAGAAGTGA
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| Protein sequence | MDNSPKQLAK MPKRWKWLGI ILSLYALAGF LLVPWVISTT LTDLTQKRLQ LTSHIEKVRF
NPFTFTLQID QLVLQQPDGS EFAGFDKLKV NFQTTSLFYW AWSFKEVHLL GLHSTIERQN
EIDNTLSTLA QRWQASAEQQ QTTAPPANAN DTLPRIRISD IQFSIARIDL LDQVPATPFA
TQLGPIHFGV SDFSTLPNKT GKQEFSFATE QGAKLSWSGN ISLAPLASEG SVAIEGPYLP
LISDYLQDTL NFKILAGDFD IDFNYAIAES SNGINVTIDK IHAGLHNLNL VSDNGEPLYK
LKSLAVSNAI VEWPAQRAHI PDIALNNGEL WVSKHSDGII NLTQLINTEQ PSSAPTEKPT
QATSESSTPW QVTTHKISIN NWQVQFNDNS IGSPASILVG PINISAKNIG TQANQLIGID
AILGITEGSL SLNTELQINP VANIAGTYSV DSIPLQLIQP YLADYAKVEL QTGLLAIQGT
LEGETPTAIT TRADLQISQL NIIENVTNTR LLGWNELNVN DVYAAPHNNE VNIASVALSE
MYADFVIAAD STTTIDRIMV EAKSTNTEPE STPSATDENS GPPMALTIGK IEILQSAGHF
ADLSLPLPFD THITKLHGEL STLASASTQP SQLSLEGQVD EYGLMRANGY LSAMDPTKNS
DIKLVFRNVS VPSFSPYSIK FAGREVQSGK LDLNLEYKLN DGKMQANNNV VLYDLALGKK
LDQPGAVDLP LDLALALLKD GNGKIDVDLP ITGDVNDPKF GIGKVAGQAI TRLITNIVTS
PFKLLASLAG SSSEDIGNIA FDAGSSNITP PELEKIYALT KALAQRPNLQ LSIGAAFEPK
LDGRALKAKK LDALLIAEAG ENSKVLTHPK TLRALENLYK QYRLEPSLNV LEQSHTKQSQ
EGKQTVDTLA YANQIKNKLI DQQPLDQIEL HTLAKARAQV IENAITEKNI AITKQIQLGE
LEAVKATKQK QIITELEINV KK
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