| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3407 |
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| Symbol | |
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| ID | 3966133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4343111 |
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| End bp | 4343737 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637922504 |
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| Product | response regulator receiver domain-containing protein |
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| Protein accession | YP_528874 |
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| Protein GI | 90023047 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG3201] Nicotinamide mononucleotide transporter |
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| TIGRFAM ID | [TIGR01528] nicotinamide mononucleotide transporter PnuC |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0778209 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGATT TTTTTAACCA AGCCATTACC GGCCTGCTGC AACAATCGCC TATAGAGCAC
ATTGCAGTGG GCCTTGGCTT GGCATACCTT ATTTTAATTA TGCGCCAAAA TGTGTGGGGC
TGGCCCTGCG CACTTATAAG TACCGCTCTA TTTACCTATG TGTTTTGGGA TGTTTCCTTA
TTTATGGAAT CTCTTTTAAA CGTGTACTAC ATGGGCATGG CGGTATATGG CTTTTGGAAC
TGGAACAGAG CGTCAGCCGA CCAGCCCACA TTACCTATTA TTACTTGGCC TTTAAAAACA
CACGCCCTCG CTTTAGGTGC TATATTTATT TTAAGTGGGG CTTCTGGCTA TTATTTAACA
ACAAATACTA CAGCTGCGTG GCCCTACTTA GATTCCTTCA CTACTTGGGG TGCAGTAATT
ACCACGTACA TGGTTGCACA AAAAGTATTC GAAAACTGGT TGTATTGGCT AGTAATTGAT
GCGGTGGCCC TGTACTTATA CATTGATAGA GGCTTGTACC CTACAGCCCT ACTCATGGCG
GTATACCTTA TCCTAGTAGT GGTAGGCCTT ATAACTTGGG CTCGCCTGCT ACAGCAACAA
GAGCCCCCAG CGTCGAACCA TGCTTAA
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| Protein sequence | MTDFFNQAIT GLLQQSPIEH IAVGLGLAYL ILIMRQNVWG WPCALISTAL FTYVFWDVSL
FMESLLNVYY MGMAVYGFWN WNRASADQPT LPIITWPLKT HALALGAIFI LSGASGYYLT
TNTTAAWPYL DSFTTWGAVI TTYMVAQKVF ENWLYWLVID AVALYLYIDR GLYPTALLMA
VYLILVVVGL ITWARLLQQQ EPPASNHA
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