| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3398 |
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| Symbol | |
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| ID | 3966124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4332672 |
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| End bp | 4333631 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637922495 |
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| Product | alkylhydroperoxidase AhpD core |
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| Protein accession | YP_528865 |
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| Protein GI | 90023038 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1535] Isochorismate hydrolase
[COG3433] Aryl carrier domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.877818 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATCC CTAAAATAAA TAATTATTCA TTAACAGGTC AAGTGAAAGC GACCAATGAG
GAATATGGCA ATCGCGTGAG TTGGCCGCTA GATGCAAATA AAGCGGTATT GCTTGTACAC
GATATGCAAA AATATTTTGT GGAATTTTAC GATCAGCAAG GCGAGCCGAT GCGGTCACTT
GTGCAAAATA TCCAAACTAT CGTCGCGCAG TGTAAAGCTG CAGGTATTCC CATTGTGTAC
ACGGCTCAGC CACCCCATCA AGCCCCAGAA GAGCGTGCGC TACTTACCGA TTTTTGGGGA
GCGGGGCTAA CCTCTGAAAA TAATCAGCAC GCTATTGTTG AGTCGCTAAA GCCCGCTGCT
GACGATTTGG TATTTACTAA GTGGCGTTAC AGCGCTTTTC AGCGTACGCC ACTGCATGAA
TACATGGCAG AAAATAATAA AGATCAGCTG TGGATTGTTG GGGTATATGC GCACATAGGC
ATTCTGTCTA CCGCGTTAGA AGCCTTTATG ACCGATATCA AAGCGTTTGT GGTGGCCGAT
GCCGTTGCAG ATTTTTCTTC TACGGAGCAC AGCATGGCGC TGCATTATAT TAGTCGCCGT
TGCGGCAGAG TGGTTGCACT GCAGGATATT CATGTTGCTA CCGAAGAGAA TAAAGCTGCG
TTAGCATCGA AAGGCGCGAA TACCCCGCAA ACGGGAAGTG AAATTTTAAA TAATATTGCT
GTGTCTGTTA GCACCGCACT TGGTATGGCT GTAGAAGAGT TAGATCAAGA CGAGAATCTA
TTTGAAATGG GGCTGGACTC CATTCGGCTA ATGGCCATAG TAGATGTGTT ACGAGAAAAT
AATATAGAAA TTGGCTTTGC CGAACTTGCC GAGCAGCCCA CGCTAAAAGC TTGGGCTGCA
ATGTTGGGTG CTCTACCCGT AATTAGCGCG CAAGAAAATA GGCTAGTAAC CAATGAGTAA
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| Protein sequence | MAIPKINNYS LTGQVKATNE EYGNRVSWPL DANKAVLLVH DMQKYFVEFY DQQGEPMRSL
VQNIQTIVAQ CKAAGIPIVY TAQPPHQAPE ERALLTDFWG AGLTSENNQH AIVESLKPAA
DDLVFTKWRY SAFQRTPLHE YMAENNKDQL WIVGVYAHIG ILSTALEAFM TDIKAFVVAD
AVADFSSTEH SMALHYISRR CGRVVALQDI HVATEENKAA LASKGANTPQ TGSEILNNIA
VSVSTALGMA VEELDQDENL FEMGLDSIRL MAIVDVLREN NIEIGFAELA EQPTLKAWAA
MLGALPVISA QENRLVTNE
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