| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3388 |
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| Symbol | |
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| ID | 3965937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4322422 |
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| End bp | 4323657 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637922485 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_528855 |
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| Protein GI | 90023028 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.640963 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATA GCAAAACCTC GCTAAACAAA GACAAAATTA AATTTCTACT GCTGGAAGGC
GTACACCAGT CCGCTGTAGA CAGTTTGAAA AACGCCGGCT ACACCAATAT TGAGTACCAC
AAAGCGGCAT TGAACGAAGA CGAGCTAATA GAAGCAATAA AAGATGCACA CTTTGTTGGC
TTGCGTTCAC GCACCCAGTT AACCCGCAAG GTATTTGAAA ACGCGCCGAA ATTAGTTGCT
GCAGGTTGTT TCTGTATTGG TACCAACCAA GTAGACCTAC AAGCCGCCAC CGAGCACGGC
GTAGCCGTAT TTAACGCCCC CTACTCCAAC ACCCGCAGCG TGGCAGAACT GGTTATTGCT
GAAGCAATTT TATTATTGCG CGGTATTCCG GCTAAAAATG CTGGCTGTCA CCGCGGTGAA
TGGCAAAAAA GTGCCGAGGG CTCTTTCGAG ATTCGCGGCA AAACCTTGGG CATTATTGGT
TACGGCTCTA TTGGTAGCCA AATGAGCGTA CTGGCCGAAT CTTTGGGTAT GCGCGTATTT
TTCTACGATG TTATCAACCG TTTGCCATTG GGCAACGCCG TACAGTGCAA ATCGTTAAAC
GAACTGTTGG CCAAATCAGA TGTTGTTAGC TTGCATGTAC CCGAAACCGG CGCCACTAAA
AACATGATTG GCGAGCGCGA AATTAACGCC ATGAAGAAAG GCGCTATTTT ACTTAACGCC
TCACGCGGTA CCGTTGTAGA TATCGATGCC TTAGCTGCAG CCATGGAGAG CGGCCACATC
GCAGGTTGCG CCATTGACGT ATTCCCCGTT GAACCAAAAG GTAACAACGA AGAATTCCAA
AGCCCATTGC GCGCGTTCGA CAACGCTATT CTTACGCCGC ACATTGGTGG CTCCACCATG
GAAGCACAAG AGAACATTGG CTTTGAAGTA GCAGAAAAAC TGGTAAAATA CTCCGACAAT
GGCACCACCA TCACCTCTGT AAACTTCCCA GAAGTAGCCT TGCCTTCGCA CGACAAGGTG
CACCGCTTGC TGCACGTACA CAAAAACGTA CCGGGTGTAC TTACCGCGAT TAACAAAATC
TTCTCGGAAA GCGACATCAA CATTTGCGGC CAGTACCTGC AAACCAACGA CAAGCTGGGC
TATGTGATTT TAGATGTAGA TCGCGCCTAC AGCGAGATGG CACTTGAGCA ATTGCGTAAA
GTGACTGGCA CAATTCGCTG CCGAGTATTA TTTTAA
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| Protein sequence | MTDSKTSLNK DKIKFLLLEG VHQSAVDSLK NAGYTNIEYH KAALNEDELI EAIKDAHFVG
LRSRTQLTRK VFENAPKLVA AGCFCIGTNQ VDLQAATEHG VAVFNAPYSN TRSVAELVIA
EAILLLRGIP AKNAGCHRGE WQKSAEGSFE IRGKTLGIIG YGSIGSQMSV LAESLGMRVF
FYDVINRLPL GNAVQCKSLN ELLAKSDVVS LHVPETGATK NMIGEREINA MKKGAILLNA
SRGTVVDIDA LAAAMESGHI AGCAIDVFPV EPKGNNEEFQ SPLRAFDNAI LTPHIGGSTM
EAQENIGFEV AEKLVKYSDN GTTITSVNFP EVALPSHDKV HRLLHVHKNV PGVLTAINKI
FSESDINICG QYLQTNDKLG YVILDVDRAY SEMALEQLRK VTGTIRCRVL F
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