| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3380 |
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| Symbol | |
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| ID | 3965929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4309277 |
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| End bp | 4311898 |
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| Gene Length | 2622 bp |
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| Protein Length | 873 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637922477 |
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| Product | phosphoenolpyruvate carboxylase |
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| Protein accession | YP_528847 |
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| Protein GI | 90023020 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2352] Phosphoenolpyruvate carboxylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000188284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.443016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAAAC TACCAGAAAG ATTACGTGAG AACGTTCGCA TACTAGGCGA CCTACTTGGC
GAGACACTGC TTGAGCACGA AGGCCCCGCA CTGTTTAGGA AGGTAGAAGA AATTCGCGCT
TTGGCGAAAT CCTTAAACAA AGGCACCGCC AGCGACGCGA GCCAGTTGGT AGACTTACTT
AGCCAGCTTG AAGATAAGGA CATCCTGCCC ATTGTGCGCG CGTTCAACCA GTTTTTGAAC
CTGGCGAACA TTGCTGATTT AGAATACTTC TCCAGTGCCG ACGCTCAGGA TAACGACGGC
CTAGATACAC TGCTTACCAA ATTAAGCAGT GATGTGGGCA AAGACCAGCT CTACGACCTA
ATGAGCACAC TGCGCATAGA CTTAGTACTT ACTGCGCACC CCACAGAAGT TACCCGTCGC
ACACTTATTC GCAAATACGA AAAAATTGCA CGCACCCTTT CGGACCTCAC CCGCGGTGAC
TTGCTCACCT ATGAGTCAAA TAAACTGCAA GGTCGCCTGC ACCGCTTAGT GGAAGAAGTG
TGGAACACCA ACGAAATTCG CGACGAACGC CCAACGGCTG TCGACGAAGC TAAATGGGGT
TTTGCGGTAA TCGAAAATAG CTTATGGCAC GCCGTGCCAG ACTTTATTCG CCATTTCGAC
CGTTTAAGCC GCCGCCGTTT GGGGCAGGCA TTACCCCTCG ACCTCCAACC GTTTAAGTTT
TACTCGTGGA TGGGCGGCGA TCGCGACGGC AACCCCAATG TTACCCATAA GGTAACAGAA
GAAGTGATTA TGCTGGGCCG CTGGAAAGCC GCAGATTTAT ACCTGCAGGA TTTATACGAG
CTAGGCGGCG ATTTAAGTAT GCACGAAGCA AGCGACGAAC TGCTTGCCAA CCTACCCAAC
GGCGCCAGTC CAACCCCATA CCGCGAGCGC TTACACGCCC TGCGCAAGCG TTTGGAAGTT
ACCCTAGACT GGACCGAGCG CACGCTAGCC GGCGAGAACC TTCCCGAGCC AGAAAACGCA
ATTCATCACC GCGACGACTT GCTCAAGCCA CTGTTAGATA TTCACAGCTC GCTAATTGAA
TCTGGCTTCG AGCACATTGC CAACGGCCCT ATTAGCGACA CCTTGCGCCG TATCTACGCC
TTCGGCATTA GCCTTGCCCC ACTCGATATT CGCCAAGACA GCGACCGCCA TGTGCAAGTA
CTAGACGAGC TCACTAACTA CCTAGAAATG GGCAGCTATC GCGAGTGGGA TGAAGAGAAG
CGACAAGCGT TCTTGCTAGA GCAGTTAAAT AGCAAGCGTC CACTACTTCC TGCTAACTGG
CCTGTGTCCG ACGATTCAGC CGAAGTGCTG GCTACCTGCA AAGCTATTGC GCGCCAACCG
CAGGAAACCT TGTCACACTA TGTAATATCT ATGGCCCGCC AAGCGTCGGA TGTACTTTCG
GTAGCATTGC TACTTAAAGA ATCTGGTGTA ACCTGGGATA TGCCCATTGT GCCCCTGTTC
GAAACCCTTA GCGACCTCGA AAACGGCGCA TCGGTAATGA ACACACTTTG GCAAATGCAC
TGGTACCAGC GCTACACCCA AGGCCACCAA ACCGTAATGA TTGGCTACTC AGACTCAGCC
AAAGACGCCG GTAAGTTCTC TGCCACTTGG GCTCAATACA AGTGCCAAGA AAAACTCGTA
GACCTAGCCA ACCAGTACGA AATTAACCTA GTACTGTTCC ACGGACGAGG CGGCACAGTG
GGTCGCGGCG GCGGCCCAGT AGAAAAAGCC ATGGCTTCGC AGCCACCGGG TTCTGTCGCT
GGCCGCATTC GCGTAACCGA GCAGGGCGAG ATGATTCGCT ACAAGTTTGG CTTACCGCGC
GTTGCCTTCC GCAGCTTAAG CAATTACGCC TGCGCTACAA TCAAGGCCAC GGTAACGCCA
AACCCAGCAC CCAAAGAGCA GTGGCGTGCA CTTATTGAAG ACATGTCTGA TGCAAGTTTG
GAGGGCTACC GCTCCATCGT GCGCGGCCAC AAGCACTTTG TGCCTTACTT CCGCAGCTTA
ACCCCTGAGC AAGAGCTAAA TAAACTGGCA TTGGGTTCGC GCCCCGCCAA ACGCAAAGCC
ACCGGCGGCG TGGAAAGCTT GCGCGCAATC CCATGGGTAT TTGCCTGGAC GCAAGTGCGC
CTCAACCTAC CCGGCTGGCT CGGCGCCCAT CAGGCATTGC AACATGCACT TAAAGAGCAG
CCCGACCTGC TGCAAGAAAT GCTGACCGAA TGGCCATTTT TCTCCAGCTT TATCGACCTG
CTAGAAATGG TACTAGGTAA AGCCGACAGT GCTATTTGCG GCCACTACGA ACGCCAGCTA
GTGGATGAAG AGTACCGTGA TTTGGGTGAA TTCTTGCGCG GCGATCTTGT GGCCTTGGCC
CAGCTGATTA AAGAAATTAA GAATCAGCCA GCCCTGCTAG AAGACGACCC CATGTTGCAG
CAGTCCATCA ATGTGCGTAA GCCCTATATC GACCCGCTCA ACTACTTACA AGCAGAGCTA
CTTAAGCGTG AGCGCAGCGC GGGCGAAATA AGCCCAGAGC TTGAGCAAGC GCTTAAAGTA
ACCATGGCCG GTATTTCTGC AGGTATGCGT AACACAGGCT AA
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| Protein sequence | MGKLPERLRE NVRILGDLLG ETLLEHEGPA LFRKVEEIRA LAKSLNKGTA SDASQLVDLL
SQLEDKDILP IVRAFNQFLN LANIADLEYF SSADAQDNDG LDTLLTKLSS DVGKDQLYDL
MSTLRIDLVL TAHPTEVTRR TLIRKYEKIA RTLSDLTRGD LLTYESNKLQ GRLHRLVEEV
WNTNEIRDER PTAVDEAKWG FAVIENSLWH AVPDFIRHFD RLSRRRLGQA LPLDLQPFKF
YSWMGGDRDG NPNVTHKVTE EVIMLGRWKA ADLYLQDLYE LGGDLSMHEA SDELLANLPN
GASPTPYRER LHALRKRLEV TLDWTERTLA GENLPEPENA IHHRDDLLKP LLDIHSSLIE
SGFEHIANGP ISDTLRRIYA FGISLAPLDI RQDSDRHVQV LDELTNYLEM GSYREWDEEK
RQAFLLEQLN SKRPLLPANW PVSDDSAEVL ATCKAIARQP QETLSHYVIS MARQASDVLS
VALLLKESGV TWDMPIVPLF ETLSDLENGA SVMNTLWQMH WYQRYTQGHQ TVMIGYSDSA
KDAGKFSATW AQYKCQEKLV DLANQYEINL VLFHGRGGTV GRGGGPVEKA MASQPPGSVA
GRIRVTEQGE MIRYKFGLPR VAFRSLSNYA CATIKATVTP NPAPKEQWRA LIEDMSDASL
EGYRSIVRGH KHFVPYFRSL TPEQELNKLA LGSRPAKRKA TGGVESLRAI PWVFAWTQVR
LNLPGWLGAH QALQHALKEQ PDLLQEMLTE WPFFSSFIDL LEMVLGKADS AICGHYERQL
VDEEYRDLGE FLRGDLVALA QLIKEIKNQP ALLEDDPMLQ QSINVRKPYI DPLNYLQAEL
LKRERSAGEI SPELEQALKV TMAGISAGMR NTG
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