| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3379 |
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| Symbol | panB |
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| ID | 3965928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4308309 |
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| End bp | 4309121 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637922476 |
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| Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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| Protein accession | YP_528846 |
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| Protein GI | 90023019 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
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| TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.140885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.310219 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTGTACA CAGCTACTCC ACTCGAGAAA AAAGTCACCG TCAACACGCT GCGCAAAATG
AAAGCGGACA AAGAAAAATT CATCACCGTT GCGCTATACG ATGCGCCAAT GGCAGCCATG
GCACAAAAGT GCGGCGTAGA AGTTGTACTA ATTGGCGATA GCCTAGGTAT GACGGTACTA
GGTTACGACA GCACCGTGCC CGTCACCATG GAACAAATGA TCTACCACAT AGAAGCGGTA
GCACGTGGTA ACAGCCGCTC ACTTATTATT GGCGACCTGC CATTTATGAC CTATGCCACG
GTAGAGCAAA CCATGATTAA CGCCACCCGC GTCATGCAGG CGGGCGCGCA TATGGTAAAA
ATGGAAGGCG GCGCTTGGCT GGTCGATTCG GTACGTATGC TGTCCGAGCG CGGCATTCCC
GTTTGCGCCC ACCTTGGCCT TACCCCGCAA TCGGTAAATA AATTTGGCGG CTTCCGCGTG
CAGGGGCGCT CCGAAGAGCA AGGCGAACAA ATAATCGCCG ATGCCCTCGC GCTAGAAGAA
GCGGGTGCAG ACTTACTGGT ATTGGAATGT ATACCTGCGG AACTGGGTGC AAGAGTGACT
CAAGCGCTTA GCATCCCCAC CATAGGTATT GGCGCTGGTA TTGGCACAGA CGCACAGGTA
CTGGTAATCA ACGATATTCT TGGGCTTACC GAGTTCCCGC CCAAATTTTC TAAAAACTTC
CTACTAGAAG CCAAAGATAT ACCCGGCGCA CTGCAAAAGT ACGCAGCAGA CGTTAAATCC
GGTGTATTCC CTGGCCCAGA GCAGCAGTTT TAA
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| Protein sequence | MVYTATPLEK KVTVNTLRKM KADKEKFITV ALYDAPMAAM AQKCGVEVVL IGDSLGMTVL
GYDSTVPVTM EQMIYHIEAV ARGNSRSLII GDLPFMTYAT VEQTMINATR VMQAGAHMVK
MEGGAWLVDS VRMLSERGIP VCAHLGLTPQ SVNKFGGFRV QGRSEEQGEQ IIADALALEE
AGADLLVLEC IPAELGARVT QALSIPTIGI GAGIGTDAQV LVINDILGLT EFPPKFSKNF
LLEAKDIPGA LQKYAADVKS GVFPGPEQQF
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