| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3375 |
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| Symbol | |
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| ID | 3965924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4303536 |
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| End bp | 4304954 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637922472 |
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| Product | two-component response regulator CbrB |
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| Protein accession | YP_528842 |
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| Protein GI | 90023015 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0307811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.146362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTAAAA TACTGATCGT AGAAGACGAA GTGATTATTC GCACAGCGCT GCGCAAGCTG
CTTACGCGCA ATAAACACGA CGTAAAAGAA GCTGGATCGA TCAGCGAGGC AACAAGCAAG
CACAAACTCG ATACCTTCGA CCTCATCATC AGCGACCTGC GCCTTCCCGG CGCCCCCGGC
ACAGACCTTA TTCAGCTAGC TGGCGACATT CCCGTATTAA TCATGACCAG TTACGCCAGC
CTGCGCTCGG CCGTAGATTC TATGCGCATG GGCGCCGTAG ACTACATAGC CAAGCCATTC
GACCACGACG AAATGCTGGC CGCCGTTAAG CGCGTACTGG GTAAATCGGC CACCCGCTTA
GCCCAAACCA ATACCGGCAA GGTAGAAAAC ACCTCGGCAA TTGAAGGCAT GATTGGCACC
AGCGCAGCCA TTAAAGAAAT TTACGGCAAA ATACACAAAG TCGCCCCAAC CAATGCCACA
GTACTGGTAT TAGGTGAAAC AGGTACGGGT AAAGAGCTAG TGGCCAACGC TATTCACCGC
GAAAGCCCGC GCAAAGACAA ACCGCTTATA TCGGTAAACT GCGCCGCTAT TCCAGAAACC
CTTATCGAAG CCGAGCTATT TGGCCACGAA AAAGGCGCCT TTACCGGCGC AGCCACCACC
CGCGAAGGTT TGGTTTCGGC CGCCGATGGC GGTACATTGT TTTTAGATGA GATTGGCGAA
TTGCCACTCG AAGCACAGGC GCGCTTACTG CGCGTACTGC AAGAAGGTGA AGTGCGCCCA
ATTGGCTCGA TAGAGTCGCG CAAAGTGGAT GTTCGCCTAG TGGCGGCAAC ACACCGCGAT
TTGGGCCGCT TGGCCCGCGA AGGTAAATTC CGCGAGGATT TATACTTCCG TATTAACGTT
GTACAAATTA AGTTACCGCC CCTACGCGAG CGCGGCAAAG ACATACTCGC ACTGGCCGAG
ACCTTTGTTA AACGCTACTG CGTAGAAATG TTAAAACCGC ACCTAACCCT CACCCCAGAG
GCCATTCAGG CTATTACCAC GTACACTTGG CCGGGCAATA TTCGCGAGTT AGAAAACGCG
ATCCAAAGAG CAGTTATTTT GTGCGACGAC GAAGTGGAAA TCGATCATAC CCACTTATCG
ATAGATTTAG ACCTAATTCG CGTAGACGAA TACCGCGAAC AGCAATACGC CCCAGAACCA
CAGCGCAATC AGCAGCACAA CACCTCGGCC AAACCCGACC CCAACGAAGA CCTCTCTCTC
GAAGACTACT TCCAACGCTT CGTCCTCGAA CATCAAGACA CCATGAGCGA AACCGAATTG
GCGCGTAAAT TAGGCGTTAG TCGCAAATGC TTGTGGGAAC GTCGCCAGCG TCTGGGTATC
CCCCGCAAAA AGCCTACCCA GTCGGCAACA ACCGACTAA
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| Protein sequence | MSKILIVEDE VIIRTALRKL LTRNKHDVKE AGSISEATSK HKLDTFDLII SDLRLPGAPG
TDLIQLAGDI PVLIMTSYAS LRSAVDSMRM GAVDYIAKPF DHDEMLAAVK RVLGKSATRL
AQTNTGKVEN TSAIEGMIGT SAAIKEIYGK IHKVAPTNAT VLVLGETGTG KELVANAIHR
ESPRKDKPLI SVNCAAIPET LIEAELFGHE KGAFTGAATT REGLVSAADG GTLFLDEIGE
LPLEAQARLL RVLQEGEVRP IGSIESRKVD VRLVAATHRD LGRLAREGKF REDLYFRINV
VQIKLPPLRE RGKDILALAE TFVKRYCVEM LKPHLTLTPE AIQAITTYTW PGNIRELENA
IQRAVILCDD EVEIDHTHLS IDLDLIRVDE YREQQYAPEP QRNQQHNTSA KPDPNEDLSL
EDYFQRFVLE HQDTMSETEL ARKLGVSRKC LWERRQRLGI PRKKPTQSAT TD
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