Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3358 |
Symbol | |
ID | 3965907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4286252 |
End bp | 4286572 |
Gene Length | 321 bp |
Protein Length | 106 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637922455 |
Product | hypothetical protein |
Protein accession | YP_528825 |
Protein GI | 90022998 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3526] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02174] selT/selW/selH selenoprotein domain |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.652713 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0967165 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTAACG TCTCACAGAG TGACCAGTGT AAGCCAAGTG TTGTTATTCA CTATTGCACC CTTTGCCAGT GGCAGTTGCG CTCGGCTTGG ATGGCGCAAG AGCTTTTGCA AACATTTGCC GATGAGTTGT ATCAAGTAGC ATTGCGCCCA GGCACTGGTG GTGTATTCGA AATTTGGGTG GATGAGCATT TAGTGTGGGA GCGCAAGCGA GACGATGGTT TTCCTGGCCC TAAGGAATTA AAGCAGCGTA TTCGCGATGT GGTTAGCCCT GATAAGTCGC TTGGTCATGT AGATCGTGCG CGTAAAGGCG AGCAAAACTA G
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Protein sequence | MPNVSQSDQC KPSVVIHYCT LCQWQLRSAW MAQELLQTFA DELYQVALRP GTGGVFEIWV DEHLVWERKR DDGFPGPKEL KQRIRDVVSP DKSLGHVDRA RKGEQN
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