Gene Sde_3358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3358 
Symbol 
ID3965907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4286252 
End bp4286572 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content50% 
IMG OID637922455 
Producthypothetical protein 
Protein accessionYP_528825 
Protein GI90022998 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3526] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02174] selT/selW/selH selenoprotein domain 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.652713 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0967165 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAACG TCTCACAGAG TGACCAGTGT AAGCCAAGTG TTGTTATTCA CTATTGCACC 
CTTTGCCAGT GGCAGTTGCG CTCGGCTTGG ATGGCGCAAG AGCTTTTGCA AACATTTGCC
GATGAGTTGT ATCAAGTAGC ATTGCGCCCA GGCACTGGTG GTGTATTCGA AATTTGGGTG
GATGAGCATT TAGTGTGGGA GCGCAAGCGA GACGATGGTT TTCCTGGCCC TAAGGAATTA
AAGCAGCGTA TTCGCGATGT GGTTAGCCCT GATAAGTCGC TTGGTCATGT AGATCGTGCG
CGTAAAGGCG AGCAAAACTA G
 
Protein sequence
MPNVSQSDQC KPSVVIHYCT LCQWQLRSAW MAQELLQTFA DELYQVALRP GTGGVFEIWV 
DEHLVWERKR DDGFPGPKEL KQRIRDVVSP DKSLGHVDRA RKGEQN