| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3357 |
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| Symbol | |
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| ID | 3965906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4283306 |
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| End bp | 4285924 |
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| Gene Length | 2619 bp |
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| Protein Length | 872 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637922454 |
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| Product | putative integral membrane protein |
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| Protein accession | YP_528824 |
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| Protein GI | 90022997 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.42147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0868518 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAGTT TTTGGTTCGA ACGTTACCTT AACTTCGTAA CGCGATTTCC CAAGGTTACC
CTCTTACTCG TTGGTTTAGT CACCCTTGGG CTAGCGGCTG GGCTGCCAAA TTTTAAATTA
GATGCATCAT CTGAGTCGCT CACCCTTGAG GCCGATACCG ATTTAGACTA CTACCGGCAG
ATTTCCAAGC GCTTCGACTC CGGCGATTTT TTGGTAGTTA CTTTTAAGCC CAACAAAGAT
TTATTTGCCG ACGAATCTCT AGCTATATTG CGCAAAATGC AAGATGAACT GGCCGCGATA
GATGGCGTTG CCAGTATCGA CAGTATTCTG AATGTGCCTT TGCTTTACAG TCCAAAACGC
AGTTTAAGCG AAACCGTTAC CGAGACGCTT ACGCTTGAAA CACCAGGCTT AGATAAATCC
CTCGCCAAGC AGGAGTTTTT ATCTAGCCCC ATTTATAAAG AGCTTATACT CAGTGAAGAT
GGCCAAACCA CGGCGCTGCA GTTAAACCTG ACGGTAGACT ACAAATATAT CGAGTTGGTG
CGCCAGCGCG ATAAGCTACG TACCCAAAGC CATTTGCCTG GTTTTACCGA GCAAGACCAA
GCGCGTTTGG ATCAGCTCTC GGAAGCTTTT CGCAAATATC GCACCACCGC AGAAGCCCGC
GCTCACAACC GTGTGGCGGA AGTGCGCAGT GTTGTAGATA AGTACCGCAA CGAGGCGCAA
ATATTTGTTG GCGGTATCAC CATGATTACC GCCGATATGA TTAGTTTTAT TCGCAGCGAT
TTGGTGGTGT TTGGCACGGC AGTGTTGCTG TTTATGATTG TAACCTTGGC CCTCATCTTC
CGCTCGTGGC GTTTGGTGGT GTTGCCAATG GCCGTTTCCA TTACCGCTGT GGTGATGATG
CTAGGTTTTA TTAGCTGGCT AGATTGGCGG TTAACGGTTA TCTCCTCCAA CTTTGTGGCT
TTGCTACTTA TTATTTCGCT GTCCATTACC ATTCACTTGG TGGTGCGCTA CCGCGAAAAC
GGTACCGAGC ACCCCTACTG GTCGCAAAAA GAGCGCATTC AAGAAACATT GCGTTTTATG
GCCAAGCCCT GTTTATACAC CGCACTTACC ACCGTTGTAG CTTTTGCTTC ACTGGTGGTA
AGTGGCATAC GCCCCGTTAT CGATTTTGGT TGGATGATGA CCATTGGGCT AATGGTGGCC
TTGGTGCTGG CTTTTGTTTT ATTGCCGGCA GGGTTGATGG CCTTGGGGGA CGACGACCCG
CTAATCGAAA CCCGCAAACG ACCAAAAGAG GCATGCAAAC CCTATAAAGG CGCCTTAGGT
GGTTTCCATC AGCCGTTAAC CGTTTACTTA TCTAAAGTAA TCGAGCGTTT TGGTAGCGGT
ATTTTATTGG GTAGCCTTGT GGTGGCAGGC TTAAGTATTT GGGGTATTTC GCGCTTAGAA
GTAGAAAACC GCTTTATTGA TTACTTCAAA GATACAACTG AAATTTACCA AGGCTTGTCG
GTTATCGATA ACGAGTTAGG TGGTACAACC ACGCTCGAAA TTATTGTTAC TGCAGATAAA
AGCGATTTAG CGCTGGCGCG CGGTGAATTT GGGCTTGTGG ATGAAGACGA CCCATTTGCC
GAGGCTGATC ATTTCGACGA GTCCGACCCT TTCGAAACGC CAGAGCCTCT TGCCGAGCAA
GACCCCTTTG CCGATGCCGA CCCCTTCTCG GAACACGGCG ACGCGGGCCA AAGTTTTTGG
ATGACCAAAG CCGGCCTAAA GAAAATTGAT GCGCTGCATA CCTATTTAGA ACAACAACCT
GAAATTGGTG TTGTGCGTTC ACTGGCAACC CTTTACCGCG TAGGGGTGGA TATTAACGGT
GGCTTAAATG ACTTTGAATT GGCGTTAATG GAAAAATCCT TACCGCAAGA TGTTAAGCAA
GTTTTGTTAT CTCCGTATTT AGTGGCAGAA GAAGAGCAAG CGCGTATTAC TCTGCGGGTA
AAAGATTTAT ACCCGGGGTT AAAACGCAAA GAGCTGGTCG ATCGCATCAA AGCGCATATA
GAGCAAGACG ATACCTTCGA AAGTAAAAAC GTGCGTTTTA CTGGCTTGTT AGTGTTGTAC
AACAACATGC AGCAAAGTTT GTTTAGCTCG CAAATTATTA CGTTAGGTGC AGTGTTTCTA
GCTATTTTGG TGATGTTTAT TCTGTTGTTC CGCTCTTTCA AAATTGCCTT TATTGCTATT
TTGCCCAACA GTTTGGCCGC GATTTCGGTG CTGGGTATTA TGGGGCTAGG CGGTTTGCCA
TTGGATATGA TGACAATCAC CATTGCGTCT ATCACGGTGG GAATAGGGGT GGATGATACG
ATTCACTATA TTCATCGGTT TAAGAAAGAA ATAGTTGTAG ATGGCGACTA CATTGCTGCC
ATGCACCGCG CGCATGCTTC TATTGGTCGG GCTATGTACT ACACCTCGGT GATCATTATT
TTTGGTTTCT CCATTATGGT GTTGTCGAAG TTTATACCCA CCATTTACTT TGGTTTGCTT
ACCGGCGTGG CTATGTTTGC GGCGTTGATG GGGGCTTTGT TGCTATTGCC CAAGCTTATT
ATTTTGTTTA AGCCCTTTGG CAAGGTTCAA CCGCAATGA
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| Protein sequence | MISFWFERYL NFVTRFPKVT LLLVGLVTLG LAAGLPNFKL DASSESLTLE ADTDLDYYRQ
ISKRFDSGDF LVVTFKPNKD LFADESLAIL RKMQDELAAI DGVASIDSIL NVPLLYSPKR
SLSETVTETL TLETPGLDKS LAKQEFLSSP IYKELILSED GQTTALQLNL TVDYKYIELV
RQRDKLRTQS HLPGFTEQDQ ARLDQLSEAF RKYRTTAEAR AHNRVAEVRS VVDKYRNEAQ
IFVGGITMIT ADMISFIRSD LVVFGTAVLL FMIVTLALIF RSWRLVVLPM AVSITAVVMM
LGFISWLDWR LTVISSNFVA LLLIISLSIT IHLVVRYREN GTEHPYWSQK ERIQETLRFM
AKPCLYTALT TVVAFASLVV SGIRPVIDFG WMMTIGLMVA LVLAFVLLPA GLMALGDDDP
LIETRKRPKE ACKPYKGALG GFHQPLTVYL SKVIERFGSG ILLGSLVVAG LSIWGISRLE
VENRFIDYFK DTTEIYQGLS VIDNELGGTT TLEIIVTADK SDLALARGEF GLVDEDDPFA
EADHFDESDP FETPEPLAEQ DPFADADPFS EHGDAGQSFW MTKAGLKKID ALHTYLEQQP
EIGVVRSLAT LYRVGVDING GLNDFELALM EKSLPQDVKQ VLLSPYLVAE EEQARITLRV
KDLYPGLKRK ELVDRIKAHI EQDDTFESKN VRFTGLLVLY NNMQQSLFSS QIITLGAVFL
AILVMFILLF RSFKIAFIAI LPNSLAAISV LGIMGLGGLP LDMMTITIAS ITVGIGVDDT
IHYIHRFKKE IVVDGDYIAA MHRAHASIGR AMYYTSVIII FGFSIMVLSK FIPTIYFGLL
TGVAMFAALM GALLLLPKLI ILFKPFGKVQ PQ
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