Gene Sde_3356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3356 
Symbol 
ID3965905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4282920 
End bp4283309 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content47% 
IMG OID637922453 
Producthypothetical protein 
Protein accessionYP_528823 
Protein GI90022996 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0217164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0851639 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATATG TAGGCGGTTG TCACTGCGGT GAAGTGCGTT TCGAAATAGA GGCGCCCGAC 
GCCTTAGAGG TGGTAAGTTG CAATTGTTCC ATTTGCAATA AAACCGGTTT TTTACACCTT
ATTTTACCGT TAAGCCGGTT TAAGTTACTG CAGGGCAAGC AGGCTATTAC CACTTACACC
TTTAACACCG GCGTTGCGAA ACACACTTTT TGCAAACACT GTGGCGTTAA GCCGTTTTAC
ACTCCGCGTT CAAACCCTGA TGGCATAGAC ATAAATGTAC GTTGTTTGGA TAACCCGCCC
GCATCGTTAA ATATTACCCC GTTCGACGGT GTGCACTGGG AAGATAACGC CGCAGAGCTA
GCTCACTTAA GTGACGAAGC TGGGGTATGA
 
Protein sequence
MKYVGGCHCG EVRFEIEAPD ALEVVSCNCS ICNKTGFLHL ILPLSRFKLL QGKQAITTYT 
FNTGVAKHTF CKHCGVKPFY TPRSNPDGID INVRCLDNPP ASLNITPFDG VHWEDNAAEL
AHLSDEAGV