| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3353 |
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| Symbol | |
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| ID | 3965902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4280331 |
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| End bp | 4281008 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637922450 |
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| Product | response regulator receiver domain-containing protein |
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| Protein accession | YP_528820 |
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| Protein GI | 90022993 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000000371413 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.100473 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTAC TAGTTATTGA AGACGAGCAG GCCATTCGCC AGCAGCTCGA AGATTTTTTT
AAATCGCAAA AGTTTGTTAT AGAAAGCGCC GAAGACGGCG AGGAAGGACT TTACCTTGGC
AGCGAGTACG ATTACGACCT TGCCATAGTA GATATAGGCC TGCCAAAACT TGATGGTATA
GAAGTAGTAA AAACACTGCG CGCCCGCGGA CGCAACTTTC CTATTCTTAT TTTAACCGCT
CGCGGCCACT GGCAAGATAA AGTCGACGGC TTAGAAGCCG GTGCCGATGA CTACCTAGTA
AAACCTTTTC ACACAGAAGA ATTGCGCGCG CGCGCCAACG CGCTTATTCG TCGCTCGGCC
GGCAAGGCTG CCCCCGAAAT GGTGTTTGGC CCCATTAACA TCAACACCGC CAACAAAAGC
GTTAGCCTTA ATGGCGCCGC GGTAGAGCTC ACAAGCTTCG AATACAACAC GCTAGAATAT
TTAGCCTTAA ATGCGGGCAA GCCAATATCT AAAACCGTAC TTACCGAGCA CCTATACCAC
CAAGATTTCG AACGCGACAG CAATGTGATA GAAGTGTTTA TTGGCAGGCT GCGTAAAAAA
CTAGACCCCG ACGGGGACCT AAAACCCATC AAAACTGTCC GAGGCTTAGG TTATCGCTTT
GCCCCCGAAG CTGTTTAA
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| Protein sequence | MKLLVIEDEQ AIRQQLEDFF KSQKFVIESA EDGEEGLYLG SEYDYDLAIV DIGLPKLDGI
EVVKTLRARG RNFPILILTA RGHWQDKVDG LEAGADDYLV KPFHTEELRA RANALIRRSA
GKAAPEMVFG PININTANKS VSLNGAAVEL TSFEYNTLEY LALNAGKPIS KTVLTEHLYH
QDFERDSNVI EVFIGRLRKK LDPDGDLKPI KTVRGLGYRF APEAV
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