| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3342 |
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| Symbol | |
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| ID | 3965891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4271107 |
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| End bp | 4271574 |
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| Gene Length | 468 bp |
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| Protein Length | 155 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637922439 |
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| Product | rRNA large subunit methyltransferase |
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| Protein accession | YP_528809 |
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| Protein GI | 90022982 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1576] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000000127948 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0166889 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATAA GTTTAATAGC CGTGGGTACT CGTATGCCCG CTTGGGTGCA GGATGGCTAC
CAAGAATACG CTAAGCGCTT ACCTAAAGAG TTGACGCCAG AGCTGGTTGA GCTGCCTCTG
GCGGTGCGAT CCAAAAGCAC CAACACTCAA AATGCTATCG CCAGCGAGGG CGACAATATG
CTCAAGCACA TTGGCTCTAA CACGCGCACC ATCGCGTTAG ATGTGCTGGG TAAATCGTTT
AGTACCGAAG TGTTATCGCA AAAATTAGCC GATTGGCAAA TGGATGGCCG CAACGTAAAT
ATTTTAATTG GCGGCCCAGA TGGTTTAGAT TCACGCTGTT TGGCGCAAGC TGACGAAAAG
TGGTCGCTAT CTGCTTTAAC CTTACCCCAC CCATTGGTGC GGGTACTGTT AATAGAGCAG
TTGTATCGCG CTTGGACCAT TTTGCAAAAT CACCCTTATC ACAAATAA
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| Protein sequence | MKISLIAVGT RMPAWVQDGY QEYAKRLPKE LTPELVELPL AVRSKSTNTQ NAIASEGDNM
LKHIGSNTRT IALDVLGKSF STEVLSQKLA DWQMDGRNVN ILIGGPDGLD SRCLAQADEK
WSLSALTLPH PLVRVLLIEQ LYRAWTILQN HPYHK
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