| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3338 |
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| Symbol | |
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| ID | 3965887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4266066 |
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| End bp | 4266959 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637922435 |
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| Product | sugar fermentation stimulation protein |
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| Protein accession | YP_528805 |
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| Protein GI | 90022978 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0797] Lipoproteins |
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| TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000024991 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0181355 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTTCC ACTTGGTTAA TCGCTGGGTA CTTGTCGCGC TATCGGGCAG CCTGCTTGCT
TTTGCAGGCT GCAGTACCTT GCCCTTGGTG GTAGAAGAGC GCGACAGTGG GCCGAGTAAG
CCGTTAAGTG TGGATCATAT ACCAGAGCCG GTGCCGCGCT ACGAGCCACG CACCCGCGCC
GGTAATTACA GCCCCTACAC TGTACTGGGT AAAACCTACC ATGTAATGGA TAACCCCGAC
GGTTACCGCG AGCGCGGTGT GGCATCGTGG TACGGCAACA AGTTTCACGG CCGACGCACC
TCCAACGGTG AAATTTACGA TATGTACGCG GTTACGGCAG CGCACAAAAC GCTGCCCATT
CCGAGTTACG TGCGGGTTAC TAACCTCGCC AACAACCGCT CTATTATCGT GCGGGTGAAC
GACCGCGGCC CGTTTCACGG CGACCGTATT ATCGACCTAA GCTATACCGC TGCGCGCAAA
CTGGGCTATG CCAACGCCGG TACCGCACAT GTGACGGTTG AATATATCGA TCCTAAAAAG
TACGCAATTA CCCAGCCTGG CTACACGGTG CCAGTCAACG ATACCGTGTT AGACGGGGTG
GCCCCAGCCC CTTCACCGGT AGACGCCGGC GGTTATCAGC TGCCAGAGGG CACCTTTTTG
CAGGTGGGCG CGTTTGGCTC GTTGCAGTCT GCACAAGCGA TGCAGCAAAA AATCAATGCA
CTTACCTACT ACCCCGTGAT TATTTTGCGC CCAGGGGAGG TAAAGGCCTA CAAAGATAAG
TTTTATCGCG TCCAAATAGG GCCTATCGAC AACAATTTGG CCTTAATCAC TATCCAAGAC
AAGGTAATAA AAGCGAATTT GCCGGAACCT CATGTGGTAA ACCGCACTCA ATAG
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| Protein sequence | MQFHLVNRWV LVALSGSLLA FAGCSTLPLV VEERDSGPSK PLSVDHIPEP VPRYEPRTRA
GNYSPYTVLG KTYHVMDNPD GYRERGVASW YGNKFHGRRT SNGEIYDMYA VTAAHKTLPI
PSYVRVTNLA NNRSIIVRVN DRGPFHGDRI IDLSYTAARK LGYANAGTAH VTVEYIDPKK
YAITQPGYTV PVNDTVLDGV APAPSPVDAG GYQLPEGTFL QVGAFGSLQS AQAMQQKINA
LTYYPVIILR PGEVKAYKDK FYRVQIGPID NNLALITIQD KVIKANLPEP HVVNRTQ
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