| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3335 |
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| Symbol | |
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| ID | 3965884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4263761 |
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| End bp | 4264411 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637922432 |
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| Product | lipoate-protein ligase B |
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| Protein accession | YP_528802 |
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| Protein GI | 90022975 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0321] Lipoate-protein ligase B |
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| TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000375701 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0176495 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACCGATT TGCCCATATT GCACGTTAAA AACCTAGGTA AAGCCGACTA CCAGCCCGTG
TGGCAGGCAA TGAAAGACTT TACCGATGGG CGCGATGCGC ATACACCCGA TGAGTTGTGG
CTGGTAGAGC ACCCCCCTGT ATTTACACAG GGCCAAGCGG GCAAAGCCGA GCATTTGTTG
GCCCCAGGCG CGATTCCGGT GGTAGCCACA GACAGGGGCG GGCAGGTCAC ATATCACGGC
CCAGGCCAAC TCGTGGCCTA CCCCTTGCTG GATTTACGCC GCTTAAAAAT AGGGGTGCGC
GAGCTTGTTA CAAAAATAGA GCAATCTGTT GTGGCATTGT TGGCCGAATA TAAGATAGAT
TCCGCGCCCA AAGCGGATGC GCCAGGTGTG TACGTAAATG GTGATAAAAT AGCCTCTTTG
GGCCTGCGAG TGCGCAAAGG GTGCAGTTTT CACGGTGTAG CAATCAACGT AGATGTTGAT
TTGGCGCCCT TTAACCAAAT TAACCCCTGT GGTTATGCGG GCCTTAATAT GACCCGGTTG
GTTGATTTAG TTGATACAAC CAAACAACCA GTAGTATTTA GCGATGTGGC CAAGCGCTAC
ACGCGAATTT TATCCAACAT ACTTGGGCTA ACCGCCCAGC TAAAAGAGTA G
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| Protein sequence | MTDLPILHVK NLGKADYQPV WQAMKDFTDG RDAHTPDELW LVEHPPVFTQ GQAGKAEHLL
APGAIPVVAT DRGGQVTYHG PGQLVAYPLL DLRRLKIGVR ELVTKIEQSV VALLAEYKID
SAPKADAPGV YVNGDKIASL GLRVRKGCSF HGVAINVDVD LAPFNQINPC GYAGLNMTRL
VDLVDTTKQP VVFSDVAKRY TRILSNILGL TAQLKE
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