Gene Sde_3327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3327 
Symbol 
ID3965876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4255903 
End bp4256427 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content50% 
IMG OID637922424 
Productphenylacrylic acid decarboxylase 
Protein accessionYP_528794 
Protein GI90022967 
COG category[S] Function unknown 
COG ID[COG4675] Microcystin-dependent protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00449816 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAGAAC CCTATGTTGG AGAGATCCGA ATGTTCGCTG GAACCTTCGC CCCTAGAGGC 
TGGGCTTATT GCGACGGACA GTTATTAGCC GTTTCCCAAA ATGATGTATT GTTTTCATTG
TTGGGTACTA TTTACGGGGG GGATGGGCGC ACAACATTTG GCTTGCCAGA TTTGCGTAGT
CGAATTCCAT TGCACCAAGG AATCGGCCCT GGGCTTAGCC CAAGGCGACT AGGCTCAAGG
GGCGGATCAG AAAGTGAAAC GTTAACCGCT AACCAACTCC CAAGCCATTC CCACGATTTC
CACGCTTCTA GCAGCTCCAG TACCGAGGAG GTGCCGGTTG GGCGGGTGGT GGCCGACACA
ACTCAAACAG GGCTTAGGTA CTTAAATAAT AGTACACCAG ACTCTAATTT TAGTAGTGCA
GCAATTGATA GTACCGGCGG TAGTCAACGC CATACTAACC TAATGCCGTC GCTCTGCATT
CACTATATTG TCGCGCTTAT GGGCATCTAC CCAACGCGTA GTTAG
 
Protein sequence
MSEPYVGEIR MFAGTFAPRG WAYCDGQLLA VSQNDVLFSL LGTIYGGDGR TTFGLPDLRS 
RIPLHQGIGP GLSPRRLGSR GGSESETLTA NQLPSHSHDF HASSSSSTEE VPVGRVVADT
TQTGLRYLNN STPDSNFSSA AIDSTGGSQR HTNLMPSLCI HYIVALMGIY PTRS