| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3326 |
|---|
| Symbol | |
|---|
| ID | 3965875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 4255361 |
|---|
| End bp | 4255891 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637922423 |
|---|
| Product | forkhead-associated |
|---|
| Protein accession | YP_528793 |
|---|
| Protein GI | 90022966 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4675] Microcystin-dependent protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00443869 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAC CATTTATTGC AGAAGTGCGA ATATTTGCGG GTAGCTTCGC GCCTAGAGAT
TGGGCGTTTT GTGACGGCCA ATTGCTGCCC ATTGCGAACA ATGCAGCGTT GTTCTCATTG
ATTGGCACCA CCTATGGTGG AGACGGTCGC GCTACAGTAG GCTTACCAAA TTTACAAGGG
CGCGCAGCTA TGCATCCTGG GCGAGGGCCT GGTTTGACTG CTCGGCGCTT GGGGGAGAGA
GTAGGCGTCG AAACTGTGAC GCTAAACGAG GCTCAAATAC CATCGCATAC CCATCAATTA
CGGGGTAGCT CCAGTGCTGG CGCTGAGACA GTCCCTAGCC CCACGGCTTC TATGGCTCAG
CCCCGTGGCG GTAGAATTTA CAATAATCAA GCACAAACTC AACCCCTAGA ATCATTGGCA
AGCCTAGCCG CAGGGGATAC AGGGGGTAGT CAGTCACACA ATAATATGCA GCCCTATATT
GCTATGAATT TTATTATTGC ATTAATGGGC TTATATCCAA GTAGAAGCTA A
|
|---|
| Protein sequence | MSEPFIAEVR IFAGSFAPRD WAFCDGQLLP IANNAALFSL IGTTYGGDGR ATVGLPNLQG
RAAMHPGRGP GLTARRLGER VGVETVTLNE AQIPSHTHQL RGSSSAGAET VPSPTASMAQ
PRGGRIYNNQ AQTQPLESLA SLAAGDTGGS QSHNNMQPYI AMNFIIALMG LYPSRS
|
|---|
| |