Gene Sde_3319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3319 
Symbol 
ID3965868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4238730 
End bp4239098 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content49% 
IMG OID637922416 
Producthypothetical protein 
Protein accessionYP_528786 
Protein GI90022959 
COG category[S] Function unknown 
COG ID[COG3795] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.419553 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000411841 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAAATATC TCGCTTTGGT GTATTACAAC GAAGGCACAA TACAGGCCAT GTCGCAGGAG 
GAGTGGGACT CCCTCAATAG AGAGTGTATG GAGTGCGTGG AAAGCTTAAG CGCTAGTGGC
CATTATATCG ATGGGGCACC ACTGCAAATG ACAAACACGG CCGCGACGTT GCGGGTGCGT
AACGGTAAAT CCTCCATCAC CGATGGGCCT TTTGCTGAAA CGAAAGAACA GTTGGCGGGG
TTCTATATGT TAGAAGCCAA AGACTTTAAT GAGGCGTTGC GACTTGCAGA AAAAATACCG
CCTGCTCGAT ACGGAAGTGT TGAAATTAGG CCGGTACGAG AGTTGGCTAG CGAAGGAAAT
ATTCAATAG
 
Protein sequence
MKYLALVYYN EGTIQAMSQE EWDSLNRECM ECVESLSASG HYIDGAPLQM TNTAATLRVR 
NGKSSITDGP FAETKEQLAG FYMLEAKDFN EALRLAEKIP PARYGSVEIR PVRELASEGN
IQ