| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3305 |
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| Symbol | |
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| ID | 3965816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4216018 |
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| End bp | 4216887 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637922402 |
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| Product | rare lipoprotein A |
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| Protein accession | YP_528772 |
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| Protein GI | 90022945 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.40538 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.056072 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTCGT CGCTAGCTCA ATATGGATAT CGTGTAGGCC GCGTTTTAGC TTTGGTTGGC
TGCTGCCTAT TTTTTACCGC CTGTTCCACT AAAATGGCTT ATAACTTTTT AGATTGGGGC
TTAATGTGGT ACGTAGAACG CTACGTAGAT TTAAACAAAG AGCAAAAAGA CAAAGCCGAA
GCAGCGATAG ATAAATTCCA CCATTGGCAC AGAACCACAC AACTGCCGCG CTACGCTAAA
TATATTACCG ACTTAAAAGA GCGCATGGCA CAACCTGTTA CAGCCGACCA ATTGCACGCC
GAGACCGACG AAATTCAAAT ATTCTTAGAC GATTGCGTTG CGTTTTTATT GCCCACTGCC
GTCGATATTG TAAGCAGCTT TTCTGAAGAG CAAGTGCAAC AGGTACTGGA AAAGTTCGCC
AAAGACAGAA AAGACTACGA CAAAAAATAT ATTTCCACAT CCATGGAAAA GGTCGTTAAA
GCGCGCCAAA ACGAGCTAAA AGATCAAATT GGCCCGCTGT TCGGCCGCTT TACCGATCAG
CAGCAAAAAT GGGTCGACGA GTGGTCCACA GGCATGGAAT ATTACGAACC CCTGATGCTC
GCGCAGCAGG AGGATTGGGC CAAAATGCTA GAAGAAGTAC TGCAAAAAAG AGACGATAAA
AAACTGTTAG ACGCATCGTT GCGCAAACTT ATGTTTTACC GCAGCGACGA CTGGGACCCA
GAGTTAGAAA AACAAATCGA CATCAACCAA ACCCTCACGC TAGAAATGAT GGCCAAGTTT
ATGAACCACC TCACTCCCAC TCAACGCGAG CGCTTTAACA AAAAGCTCGA CAAGTACGTA
GAAGTATTCA CTGAGCTAAG CAGCGAGTAG
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| Protein sequence | MRSSLAQYGY RVGRVLALVG CCLFFTACST KMAYNFLDWG LMWYVERYVD LNKEQKDKAE
AAIDKFHHWH RTTQLPRYAK YITDLKERMA QPVTADQLHA ETDEIQIFLD DCVAFLLPTA
VDIVSSFSEE QVQQVLEKFA KDRKDYDKKY ISTSMEKVVK ARQNELKDQI GPLFGRFTDQ
QQKWVDEWST GMEYYEPLML AQQEDWAKML EEVLQKRDDK KLLDASLRKL MFYRSDDWDP
ELEKQIDINQ TLTLEMMAKF MNHLTPTQRE RFNKKLDKYV EVFTELSSE
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