Gene Sde_3299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3299 
Symbol 
ID3965810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4209758 
End bp4210087 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content45% 
IMG OID637922396 
Producthypothetical protein 
Protein accessionYP_528766 
Protein GI90022939 
COG category[S] Function unknown 
COG ID[COG4517] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones63 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.222898 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAAG ATCCAATTTA CAAAGTTATC TTCCACAACT TAGATCAGGT GTATGAAATA 
TACGCCCGCG CGATCTATCA AAGCGAAATG TACGGTTTTG TGGAAGTAGA AGAATTTGTG
TTCGGCGAGC GCACTCAGTT GGTGGTCGAC CCTGGCGAAG AGAAGCTAAA AGGCGAGTTC
GCCGGTGTGA AGCGTTCGTT TATACCTATG CACAGCATTA TTCGTATAGA TGAAGTAGAA
AAAGAAGGTG TTGTTAAGGT ACTGGAAGTA AAGGGCGACA AGGTTGCTCA GTTTCCGTAT
CAGGCGCCTA TTCCTCGCCC CGAAAAATAA
 
Protein sequence
MSKDPIYKVI FHNLDQVYEI YARAIYQSEM YGFVEVEEFV FGERTQLVVD PGEEKLKGEF 
AGVKRSFIPM HSIIRIDEVE KEGVVKVLEV KGDKVAQFPY QAPIPRPEK