Gene Sde_3298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3298 
Symbol 
ID3965809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4208946 
End bp4209722 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content49% 
IMG OID637922395 
Producthypothetical protein 
Protein accessionYP_528765 
Protein GI90022938 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.24994 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTAGCAT TAAATTTTCG CATACTGGGT GAGCCCCACC CAGATTTGCC ACCTATATTA 
GTTATTCACG GTCTGTTTGG TTCGCTAGAA AATTTGGCCG GCGTGGCTCG GCCTCTAGCA
GAAAGCCGCA ACGTATACTC TATCGACCTG CCCAACCATT CCCGTTCTCC TCATACCGAA
ACCACGAGCT TGGTGCAAAT GGCTGAAGAA GTATTGGCGT GGATGGATTC GCAAGGGCTT
GCGAAAATAG ACTTAGTTGG TCACTCGCTG GGCGGTAAGG TTGCAATGGA GATAGCTCTG
CAGCACCCAG AGCGGGTAAA CCGGTTAGTG GTAATGGATA TAGCGCCAGT AAAATACCCA
CCGCACCACA ACCAAGTATT TGCCGGCTTA CAAAGTTTAG ATACCCAAAG CTTAAGCAGC
CGCAGCGCAG CCGATGCGCA TATGTTGCAG TATGTACCAG AGCTTGCAGT ACGCAGCTTT
TTGTTAAAGA ACCTAATAAA AAGTGGCGAC GGTTTCGCTT GGCGTTTTAA CCTGCCGGTG
GTAGCGCGGG ATTACCCCGA ATTAATTGCG GGTAACAGCG CAGGTGTATT TGAAGGCCCC
GTCATGTTTT TGAAAGGCGG CGATTCCGAC TACATTACCG AAGTGCATCG CGAACCCATT
CTTACGCGCT TCCCGAATGC ATCGGTAAAA GTGGTAGAGA AAACTGGCCA CTGGCTACAT
GCAGATAAGC CGGTCGTTGT GGCAAAACTA ATTAAAAACT TTTTAGATAA AGAGTAA
 
Protein sequence
MLALNFRILG EPHPDLPPIL VIHGLFGSLE NLAGVARPLA ESRNVYSIDL PNHSRSPHTE 
TTSLVQMAEE VLAWMDSQGL AKIDLVGHSL GGKVAMEIAL QHPERVNRLV VMDIAPVKYP
PHHNQVFAGL QSLDTQSLSS RSAADAHMLQ YVPELAVRSF LLKNLIKSGD GFAWRFNLPV
VARDYPELIA GNSAGVFEGP VMFLKGGDSD YITEVHREPI LTRFPNASVK VVEKTGHWLH
ADKPVVVAKL IKNFLDKE