Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3298 |
Symbol | |
ID | 3965809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4208946 |
End bp | 4209722 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637922395 |
Product | hypothetical protein |
Protein accession | YP_528765 |
Protein GI | 90022938 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.24994 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTAGCAT TAAATTTTCG CATACTGGGT GAGCCCCACC CAGATTTGCC ACCTATATTA GTTATTCACG GTCTGTTTGG TTCGCTAGAA AATTTGGCCG GCGTGGCTCG GCCTCTAGCA GAAAGCCGCA ACGTATACTC TATCGACCTG CCCAACCATT CCCGTTCTCC TCATACCGAA ACCACGAGCT TGGTGCAAAT GGCTGAAGAA GTATTGGCGT GGATGGATTC GCAAGGGCTT GCGAAAATAG ACTTAGTTGG TCACTCGCTG GGCGGTAAGG TTGCAATGGA GATAGCTCTG CAGCACCCAG AGCGGGTAAA CCGGTTAGTG GTAATGGATA TAGCGCCAGT AAAATACCCA CCGCACCACA ACCAAGTATT TGCCGGCTTA CAAAGTTTAG ATACCCAAAG CTTAAGCAGC CGCAGCGCAG CCGATGCGCA TATGTTGCAG TATGTACCAG AGCTTGCAGT ACGCAGCTTT TTGTTAAAGA ACCTAATAAA AAGTGGCGAC GGTTTCGCTT GGCGTTTTAA CCTGCCGGTG GTAGCGCGGG ATTACCCCGA ATTAATTGCG GGTAACAGCG CAGGTGTATT TGAAGGCCCC GTCATGTTTT TGAAAGGCGG CGATTCCGAC TACATTACCG AAGTGCATCG CGAACCCATT CTTACGCGCT TCCCGAATGC ATCGGTAAAA GTGGTAGAGA AAACTGGCCA CTGGCTACAT GCAGATAAGC CGGTCGTTGT GGCAAAACTA ATTAAAAACT TTTTAGATAA AGAGTAA
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Protein sequence | MLALNFRILG EPHPDLPPIL VIHGLFGSLE NLAGVARPLA ESRNVYSIDL PNHSRSPHTE TTSLVQMAEE VLAWMDSQGL AKIDLVGHSL GGKVAMEIAL QHPERVNRLV VMDIAPVKYP PHHNQVFAGL QSLDTQSLSS RSAADAHMLQ YVPELAVRSF LLKNLIKSGD GFAWRFNLPV VARDYPELIA GNSAGVFEGP VMFLKGGDSD YITEVHREPI LTRFPNASVK VVEKTGHWLH ADKPVVVAKL IKNFLDKE
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