| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3278 |
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| Symbol | |
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| ID | 3965770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4186558 |
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| End bp | 4188306 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637922375 |
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| Product | response regulator receiver domain-containing protein |
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| Protein accession | YP_528745 |
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| Protein GI | 90022918 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3855] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0042414 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00718988 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACCAGCA ACGCATTAAA AGTATTTATC TCCGATCTTC ATGGCGAACT CGATGTTTTT
GATTTTCTCG CCGACCGCCA ATTCGGCATA CTTCATCTAT TAATTCGCCA GCAATTTTCT
CCCGAGCTAA ATGAAACTCT GTGCGCGGCT ATTGAGGCTA GCGCTATTCG TTTATGCCGT
GCTGCAAACG CTAGCCAAGC TCAGCTCGAT CGCACTAGTG CTGTAAGCAA AGAAATACTT
TTTACAGCAC TTTTTTTAAT GGTGGTACAG CAAAAAGCAG AAGACGAGTC GCTTACTATA
GCTATTCGCC GGTGGGGCTG GTTGTCTACC GTGCATCGGG CCTTAAGTGG TGATGCGCAG
TTAAGTTGTA CGCCATTTAG TCAGCTTGTT GAAATGCTTG CGCAGAATAT TCGCACTTTA
AGTGCGCAAG ATTTTTTCGC GCTAGTGCAG GCGTTTGCAA AAGCGTTATT TAAAAAGTTA
AGCCCAGAAT TGAATATAGT TGGCGATATT TATGATAGAG GGCAAGATGC TTTCGCCATT
ATGGAGCGAT TGCGCGGGCT GCCGAATGTG GCTATTCAGT GGGGCAATCA CGATGTAGTG
TGGATGGGTG CTGCGTCGGG CAACCTTGCG TGTATTACGG TGGCGGTGCG TATTTGTTTG
CGCTACGGCA CGTTAGATAT GTTGCACCGC GATTACGGTA TCAACCTCTC TCGTTTAGAA
CGGTTTGCTG CTAAAGCCTA CGGCGATGAT GATTGTGCGC AGTTTACCCC CAAGGGCGAC
CTTAACGCTG AAGAAAAGCT GCGCATTGCG CGTATGCACA AAGCCATATC AATTATTCAA
TTTAAGCTTG AAGGTAAGCT TATTGCCCGT CGGCCAGAAT ATACAATGGC CGATAGACTG
CTGTTGGATA AAATAAATAT TGCCAATAGC ACGGTTACTG TGGGTGATGC TGTGCATCCA
CTATTAGACT CGAATTTTCC TACGCTGGAT GTAGAGCAGC CTTATCGCTT AAGTGAAGAT
GAACGCAAAG TTGCAGAAGA TCTTAAGCAG CAGTTTCTTG CCAGCGCAAA GCTTACCCAG
CATATGGATA TACTTTTTCA CCGCGGTGGA ATGCAAAAGA AAACAGGAGA TTGGCTGCTT
TATCACGCCT GTGTACCCGT TGACGAACAG GGAGAGTTTC AACCTTTTGC GCTTGCACCA
GAAACCACAC GTGGACAAAG CCTGTTTAAC TTCTGCGAGC TGGAAATGCG GCGCGGTTAT
TTAAATAGAA TGGTCATTAA TGACCGCAAT GAGTCCGATA TTGCTTGGTT TTTATGGTGC
GGCCCTCATT CTCCTTTATT TGGCAAAGCC AGAATGACCA CCTTTGAACG CTATTTTGTG
GCCGATAAGC AAACCCACAA AGAAGGTAAA AATGAATACT ACAACCTTCG CTCCAACCCT
GAGTTTTTAG CACGCGTTGC CACGGAATTA AAATGCAGTA GCGATCAGGT GCGCATTGTA
AATGGACACG TGCCGGTTAA GTATCAATCT GGCGAGCGCC CAGTGCAGGC CAATGGCAAG
CTCTTTTCTA TTGATGGCGG GTTCTCTATG CCCTATCGCT CAGCCACCGG TTTGGCGGGC
TTTGTACTGC TTGAAGCGCT TGGTCAAATA GTTTTATATC GGGTAATCCC CAACGACAAG
CGCTATGCTT TAGAAGTGGA ATATCAACAA ATACTAAAGC CTAAAGCTGC AAGTGTGCCT
GCTGCTTAG
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| Protein sequence | MTSNALKVFI SDLHGELDVF DFLADRQFGI LHLLIRQQFS PELNETLCAA IEASAIRLCR
AANASQAQLD RTSAVSKEIL FTALFLMVVQ QKAEDESLTI AIRRWGWLST VHRALSGDAQ
LSCTPFSQLV EMLAQNIRTL SAQDFFALVQ AFAKALFKKL SPELNIVGDI YDRGQDAFAI
MERLRGLPNV AIQWGNHDVV WMGAASGNLA CITVAVRICL RYGTLDMLHR DYGINLSRLE
RFAAKAYGDD DCAQFTPKGD LNAEEKLRIA RMHKAISIIQ FKLEGKLIAR RPEYTMADRL
LLDKINIANS TVTVGDAVHP LLDSNFPTLD VEQPYRLSED ERKVAEDLKQ QFLASAKLTQ
HMDILFHRGG MQKKTGDWLL YHACVPVDEQ GEFQPFALAP ETTRGQSLFN FCELEMRRGY
LNRMVINDRN ESDIAWFLWC GPHSPLFGKA RMTTFERYFV ADKQTHKEGK NEYYNLRSNP
EFLARVATEL KCSSDQVRIV NGHVPVKYQS GERPVQANGK LFSIDGGFSM PYRSATGLAG
FVLLEALGQI VLYRVIPNDK RYALEVEYQQ ILKPKAASVP AA
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