| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3277 |
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| Symbol | |
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| ID | 3965769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4185784 |
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| End bp | 4186539 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637922374 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_528744 |
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| Protein GI | 90022917 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000000689826 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00599286 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGTGTGA AATCTAAAAT AGTTATTGGC AATTGGAAAA TGAACGGCAG TGCCGAGTTG
GTGGAGTCGT TCACACGTAC CATGTTGGAT AATCAAGCGG CTTACGCAGG TATTCGCGTG
GTACTTTGCC CGCCGTTTAC TCTTCTGCAG GCTATGGCTG ATGCGCTGGA AGGTGGGCCT
ATCTTGCTTG GCGCACAAAA TGTAAGCGAG TTTGAGCAAG GGGCGCATAC CGGCGAAATA
TCCGCGCCTA TGTTGGCTTC GATGGGCACC AAAATGGTTA TTATTGGCCA TAGCGAACGA
AGGGCGTCGC GCGGTGAAAA CGATCGTATT ATTGCCGCTA AAGTAAAACA GGCGCTTTCT
GTAGGTATGC TACCCGTACT TTGCGTGGGG GAAACCGCCG AAGAAAAAGC GCGTGGTGAC
TCAGGAGCGG TGGTGTGGCA GCAGTTATCG GTTGTGCTAC ATGCTATTGG CAGTGAGCTC
TTTGGCCAGC TGATAGTAGC TTATGAACCC ATATGGGCTA TCGGGTCTGG GTCGACTGCC
TCTACTGACG ATATTCTTAC AATTACTACC GCTATTCACG CGAAGTTAGC GCAGCTAGGT
ATTCAGTTAC CACTCTTATA CGGTGGCAGT GTTAACGCAG GCAACGCAGC TCAAATATCA
TCTTTACCTA CTATTAGCGG CTTGTTGGTG GGCGGTGCCT CCTTGCAGGC AGGCCAGTTT
CTACTTTTGT GTAGTAATAC CGCAAAGGGC GCATAG
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| Protein sequence | MGVKSKIVIG NWKMNGSAEL VESFTRTMLD NQAAYAGIRV VLCPPFTLLQ AMADALEGGP
ILLGAQNVSE FEQGAHTGEI SAPMLASMGT KMVIIGHSER RASRGENDRI IAAKVKQALS
VGMLPVLCVG ETAEEKARGD SGAVVWQQLS VVLHAIGSEL FGQLIVAYEP IWAIGSGSTA
STDDILTITT AIHAKLAQLG IQLPLLYGGS VNAGNAAQIS SLPTISGLLV GGASLQAGQF
LLLCSNTAKG A
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