| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3271 |
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| Symbol | |
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| ID | 3965763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4172806 |
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| End bp | 4175475 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637922368 |
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| Product | glycosyl hydrolase |
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| Protein accession | YP_528738 |
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| Protein GI | 90022911 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0765357 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00388677 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGTTAT TTAGCAAGTA TGTATGGCAA GTGGCAGTTG CCGGAGCATT AGGTACGGTT
AGTTTGCTGG GTAGTCGTTT ATACGCGCAA ACTGCAGATA CACAGCAATG GATTGATGGC
ATAGCCAGCA ATATGCAGGT GCATTATCAA GTACTGCTAA ATAAGGGTGA CGGCGAATGC
AGCTTGCCAA GCTTACCGCC CAGCCCCAAA TCACCATGCT CTATAGTTGA GCTTTCACTC
AGCTCGCCAG ATAAGCTTGC GGCAAACGAC TTAGATGGTA ACTGGTCTAT TTACTTCAGC
CAAACCGATC CCATTTATGC GCACCCAGCT GGTGAATTTA CAATCGACCA TATAAATGGC
GATTTACACC GAATTCGCCC CAGCGCCAGC TACCAAGGAT TTAATGTGGG CGAAGTTAAA
AAGGTGCAGT TTATTGTGGC GGGTTTAACC CTTACCGAAG CCAAAATAAT GCCCAACTAT
TATGTGGTAG CAGAAGGGCA AGATAATAAA CAGGCACTAT ACAGCGAAGC CCGTGTTATC
GAATCAACAC GTATTCGTAT ACACCCAGAA ACAGGGTTAG AGGAGCGACC TTTTGCAGGC
GAAATAAGTA GGCAAAATTT TAAGCTGTCG CAGGCAGATA AAACGCCTTA CGCCGATGCC
GCTTTTATAT TTAACGAAAA TAAAAACGTA AATAAGCTGG GATTTGTAGC GCAAGACGAA
GCGCTGCGCA CAATAATACC TACGCCAACT TTTGTAATGG ACTCTGGCAA AAATATAGAT
ATTAGCGCAG GTATAAACCT GCAGCTACAG GGGGTGGAGC AAGACGCAGT TGCGCCGGCA
CTGGCGTGGC TACAAGCATT GGGCCTAAAG CAAAACCCTG CGGGCATGCC GTTTGTTGTG
TCTGTTTCGC GGGCGAGCTT ACCGTCGCGC TCGCCAGTGG GGTCCTATCA ATTGGTGGTA
TCGCCAACGC AAATTACCAT CTTTGCCCGC GAACCGGTTG GTGCGTTTTA CGGTATGCAA
TCGTTGGCGA GTGTAATGAT AGCGGGCAGA AATACTTTAC CTGTGTTAAC CGTTAACGAT
TCGCCTCGTT ACCCTTATCG CGGTATGCAC ATAGATGTAG GTCGTAACTT TCATTCCAAA
CAACAAATAC TGGATGTATT AGATCAAATG GCGGCGTACA AGCTTAACAA GCTGCATTTG
CATTTGGGTG AAGATGAAGG CTGGCGCTTG CAAATACCCA GCTTGCCAGA ACTTACTGAT
GTGGGCGGTA AGCGCTGTCA CGATCCACAA GAAAACACCT GCTTATTAAT GCAGCTTGGG
GCAGACGTAA GCGGCAAAAG TGAACGCGAT GGCTATTACA CTCGGCAAGA TTATATAGAG
CTAGTAAAAG CTGCGAATGC GCGTCACATA CAGTTAATCC CTTCTTTTGA TATGCCCGGT
CATTCGCGCG CTGTAATAAA AGCTATGGAG GCGCGTTACC GTAAATTCAT GGCCGCTGGT
AATAAAAAAG CCGCTGAACA ATATTTACTT TCAGACCCAA ACGATAAAAC GCAGTACAAA
AGTATTCAGT TTTATTCCGA TAACACGATT AACGCGTGCA TGGAATCTCC TTATAAATTT
TTAGGCAAAG TAATAGACGA AGTAAAAGCC ATGCACAGCG AAGCGGGCCA GCCGCTTACG
GTTTACCATA TAGGCGCAGA TGAAACCGCC GGTGCTTGGG CGCAATCGCC AATATGCCAA
GCGTTTTTTG CCAACAACCC TTACGGTGTA GAAAATGCCA AACAGCTAGG TGCTTATTTT
ATCGAGCGCG TGGCCGCATT ATTAGAAACT AAGGGTATTA AAACCGCAGG TTGGAGCGAT
GGTTTAAGCC ACACTAACCC AAAAAATATG CCCGCCAAGG TGCAATCGTA TATTTGGGAT
GTATTACCTT GGGGGGGCGT TGCCGAAGCA AATAAGCAAG CCAATCGAGG GTGGGATGTA
GTGCTATCTC ACCCAGACGC GCTGTATTTT GACTTCCCAT ACGAGCCAGA CCCAAAAGAA
GGCGGCTATT ATTGGGGCAG CCGCCATATA GATACCCACA AAGTATTTAA CTATATGCCC
GGTAACTTAC CGGCTTTGGC AGAGGTATAC CCAAGCCCTA CCCAAACAGG GTTTGAAATA
GCAGGCACCA CCCCATTAAA ACAAGGCGTG CAATGGGCGG GTATCCAAGG CCAGCTGTGG
AGCGAAACTA TACGCAGCGA TAACGCTGTG GAATATATGA TCTTTCCGCG TTTAATTGCC
TTGGCAGAGC GCGCATGGCA CGCACCAAGT TGGGAGCCGC CCTACAATTA CGAGGGCGCA
ACCTATAATG CTAATAGCGG TTTATTTTCT GAAAATAAAA AAAGTGAGCG CGATAAAGCG
TGGTTAAAAT TCGCAAGCGT CATTGGCTAC AAAGAATTCG TTAAGCTAGA TGCCGCCGAC
ATTCACTACC GCATACCAAC GGTGGGCGCT ATTATTCAAG ACTCCATGCT ACACGCAAAT
CTTGCTTACC CAGGGTTAGG TATTGAATAT AAAGAAGCCG GTAAAGATTG GCAGCCTTAC
AACAAGCCAG TACAAGTAAA AACGCCGGTA CTGGTGCGCG CAAAAGCCGC AACGGGGGAT
AGAAAGGGGC GTGCGTTACC TGTTGAGTAA
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| Protein sequence | MALFSKYVWQ VAVAGALGTV SLLGSRLYAQ TADTQQWIDG IASNMQVHYQ VLLNKGDGEC
SLPSLPPSPK SPCSIVELSL SSPDKLAAND LDGNWSIYFS QTDPIYAHPA GEFTIDHING
DLHRIRPSAS YQGFNVGEVK KVQFIVAGLT LTEAKIMPNY YVVAEGQDNK QALYSEARVI
ESTRIRIHPE TGLEERPFAG EISRQNFKLS QADKTPYADA AFIFNENKNV NKLGFVAQDE
ALRTIIPTPT FVMDSGKNID ISAGINLQLQ GVEQDAVAPA LAWLQALGLK QNPAGMPFVV
SVSRASLPSR SPVGSYQLVV SPTQITIFAR EPVGAFYGMQ SLASVMIAGR NTLPVLTVND
SPRYPYRGMH IDVGRNFHSK QQILDVLDQM AAYKLNKLHL HLGEDEGWRL QIPSLPELTD
VGGKRCHDPQ ENTCLLMQLG ADVSGKSERD GYYTRQDYIE LVKAANARHI QLIPSFDMPG
HSRAVIKAME ARYRKFMAAG NKKAAEQYLL SDPNDKTQYK SIQFYSDNTI NACMESPYKF
LGKVIDEVKA MHSEAGQPLT VYHIGADETA GAWAQSPICQ AFFANNPYGV ENAKQLGAYF
IERVAALLET KGIKTAGWSD GLSHTNPKNM PAKVQSYIWD VLPWGGVAEA NKQANRGWDV
VLSHPDALYF DFPYEPDPKE GGYYWGSRHI DTHKVFNYMP GNLPALAEVY PSPTQTGFEI
AGTTPLKQGV QWAGIQGQLW SETIRSDNAV EYMIFPRLIA LAERAWHAPS WEPPYNYEGA
TYNANSGLFS ENKKSERDKA WLKFASVIGY KEFVKLDAAD IHYRIPTVGA IIQDSMLHAN
LAYPGLGIEY KEAGKDWQPY NKPVQVKTPV LVRAKAATGD RKGRALPVE
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