| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3264 |
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| Symbol | |
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| ID | 3965756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4164427 |
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| End bp | 4165575 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637922361 |
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| Product | sodium-proton antiporter NhaA |
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| Protein accession | YP_528731 |
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| Protein GI | 90022904 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3004] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000713954 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGGCTCAAC AAGAAACCGC TGGGGGCGTT TTACTCATAG CTGCCTCTAT ACTGGCCTTA
ATATTTGCCA ACTCTTACTT AAGCGGCTTT TATAACGGCG TACTAAATCT ACCCTTGGTT
GTCGCTATAG GCGCATTCGA AATTTCAAAA CCACTGTTGT TATGGGTTAA CGACGGGTTA
ATGGCACTAT TCTTCTTAAT GGTAGGCCTG GAAGTTAAAC GCGAGGTGCT CGAAGGGCAT
CTTTCTCAGC CAAGCCAAGT GGTGCTGCCC GGCTTAGCGG CATTGGCAGG CGTGGCATTC
CCAGCTATAA TTTATGCAAG CTTTAACTGG CAAGACCCTA CAGCACTAAG GGGTTGGGCT
ATTCCCTCCG CGACGGATAT CGCGTTTGCC CTAGGCGTTT TTAGTCTTTT CGGGCGTCAT
CTACCTGTAT CGCTTAAGCT CTTTTTGTTA TCGGTTGCTA TATTTGATGA TATTGCAGCT
ATTGTGATTA TTGCTTTGTT CTATTCTCAC GAGCTTTCTA CGCTATCGCT CTTAGTTGCA
GGCATTGGCA TAGTAATGCT GTTTGTGTTG AACCGCTTAA AAATACGACA TGTTTCACCT
TTTATGTTTG TTGGCCTAGT AGTGTGGGCC GCGGTTTTAA AATCGGGTGT GCACGCCACG
CTGGCGGGCT TCGTTATTGC CTGGTTTATC CCGCTTAAAC ATAAAAATAT ACATGATGAG
CCCATGTTGC TGTCGCTAGA GCATGCTTTG CAGCCTTGGG TAGCCTATTT TATCTTGCCA
TTCTTTGCTT TTGTGAATGC GGGTGTGCAC CTAGGTGGCA TAGGTTTAGA TACGTTAACA
GCCCCTGTGA CGTTGGGCAT AATTGTTGGC TTATTCGTGG GTAAACAGCT GGGTATATTT
AGTGTATGTT GGTTAAGTAT TAAATTGAGA ATAGCTAAGC TGCCCGAAGG CGCGACCTGG
CGAGAGCTAT ACGGCGTGTG TTTGCTGGCG GGTATTGGTT TTACCATGAG CTTATTTATA
GGTAGCCTTG CTTTTGAGGG TGCCAATAGT GAAATGGTTG CAAGTGTTAA ATTAGGCGTG
CTGTTTGGTT CTCTGTTGTC TGCTATATGT GGTGCGCTGA TTCTAACCAA CTCAAGGAAA
ATAAAATGA
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| Protein sequence | MAQQETAGGV LLIAASILAL IFANSYLSGF YNGVLNLPLV VAIGAFEISK PLLLWVNDGL
MALFFLMVGL EVKREVLEGH LSQPSQVVLP GLAALAGVAF PAIIYASFNW QDPTALRGWA
IPSATDIAFA LGVFSLFGRH LPVSLKLFLL SVAIFDDIAA IVIIALFYSH ELSTLSLLVA
GIGIVMLFVL NRLKIRHVSP FMFVGLVVWA AVLKSGVHAT LAGFVIAWFI PLKHKNIHDE
PMLLSLEHAL QPWVAYFILP FFAFVNAGVH LGGIGLDTLT APVTLGIIVG LFVGKQLGIF
SVCWLSIKLR IAKLPEGATW RELYGVCLLA GIGFTMSLFI GSLAFEGANS EMVASVKLGV
LFGSLLSAIC GALILTNSRK IK
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