| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3262 |
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| Symbol | |
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| ID | 3965754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4162251 |
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| End bp | 4163615 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637922359 |
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| Product | hypothetical protein |
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| Protein accession | YP_528729 |
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| Protein GI | 90022902 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00244031 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGTATT TCTTAAAATA TTTTGTGTGT AATCCGATTA ACACTGTGCA ACATTTTATA
GTTGGTGCAG TACTAGCAAT TTGCACAAGT CACGTTTTTG CAGCTGCTAG CACGGTAGGA
ATTGTAAGAA CACCCGAAGG GTTCCAGTTA AGTGTGAATA AAGTCCCTTT TGTCGTAAAT
GGCGTGGGGC TCGGCTATCA AAATGAAGAG CAAGTGCGTG CACTTAAGCA AGCCGGTGGC
AATAGCTTTA GAACGTGGAG CACTCGCAGT ATTGAAAAAG AGTTGGCGTT AGCCCAAGAG
CTAGGCTTAA TGATTGCGGT CGGCATTGAA ACCGGTAAGG AGTTGCAAGG GTTCGATTAT
AACAATCAAG CCGAAGTCGA TAGGCAATTT GAACGTGTGG CGGCCATTAT CGAAAAGTAT
AAGAATCACC CTAATGTGTT GTGTTGGGTA ATTGCGAATG AGCCTAACTT ACTGTTTGAC
GATAAAGGTG GCCTAGCAGA CGTTAACCCT AAGGTGTACA AAGCTTTGGG CGATATAATT
GATCATATTC ACAAAGTAGA CCCGAACCAC CCGGTAACGT TTACTTTTGC CGGCGCAATG
AAAAAGCATA TAGACACCGC ACTTACTTAT GCACCTAATA TCGATATTAT CTCGGTGCAG
CTATACGGTG AGTTAGAAGG CCTTGGCGAA ACCATTAATG CATTGAATAT AGATAAACCG
TTTATGGTCA CCGAGTTTGG CCCCAAAGGA CATTGGGAAA CTGAAGCGAC CAGTTGGGGG
CGAGAAATAG AAGAGCCCAG TGCAATTAAA GCAGCGGGCA TGGCCGAGCG TATGCGAAAG
GCGATTATTA ATGATGCTTC AGGCAAGGTA ATTGGCTCAT ACGCATTTTT ATGGGGGCAA
AAGCAAGAGC GAACACCAAC ATGGTACGGC ATGTTTAATG CAGGCGGTGA GCGCACCGCG
AGGGTAGACG AGCTAACCCG CATATGGACA GGCGCTTACC CAGAAAACCG AGCTCCGCTA
AGCTACTCTA TTACGGTTAA TAATTTAGCG CCAATCGAAA GCGTCTATTT AAAGCCAAGC
GCCAAAGCTA AAGCGAAGGT TGTAGTTAGC GACCCAGATG GCGATAAATT AGAGCATAAA
TGGTATTTTA TGAAGGAAGT ATCCGTGCGC AGCCAGGGTG GTCACCATGA AGAAGAGCCA
GAAACCTTAC CTGTAAATAT TATAAGCGCT AAAGCAGGTG AAGATTATAT AGAAATAGAG
TTTACAGCGC CCAGCGAAGC CGGTGAGTAT CGGCTATTTT TATACAGTTA TGATGGCAAC
AACAACGTAG CGAATGCCAA CTTCCCGTTT ATGGTGGCGA AATAA
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| Protein sequence | MAYFLKYFVC NPINTVQHFI VGAVLAICTS HVFAAASTVG IVRTPEGFQL SVNKVPFVVN
GVGLGYQNEE QVRALKQAGG NSFRTWSTRS IEKELALAQE LGLMIAVGIE TGKELQGFDY
NNQAEVDRQF ERVAAIIEKY KNHPNVLCWV IANEPNLLFD DKGGLADVNP KVYKALGDII
DHIHKVDPNH PVTFTFAGAM KKHIDTALTY APNIDIISVQ LYGELEGLGE TINALNIDKP
FMVTEFGPKG HWETEATSWG REIEEPSAIK AAGMAERMRK AIINDASGKV IGSYAFLWGQ
KQERTPTWYG MFNAGGERTA RVDELTRIWT GAYPENRAPL SYSITVNNLA PIESVYLKPS
AKAKAKVVVS DPDGDKLEHK WYFMKEVSVR SQGGHHEEEP ETLPVNIISA KAGEDYIEIE
FTAPSEAGEY RLFLYSYDGN NNVANANFPF MVAK
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