| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3259 |
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| Symbol | |
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| ID | 3965750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4157210 |
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| End bp | 4158301 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637922355 |
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| Product | GTP-dependent nucleic acid-binding protein EngD |
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| Protein accession | YP_528726 |
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| Protein GI | 90022899 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0012] Predicted GTPase, probable translation factor |
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| TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00267729 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGCTTTA AATGCGGCAT TGTTGGGCTA CCCAACGTTG GCAAATCTAC ACTCTTCAAC
GCATTAACCA GCGCCGGTAT CGACGCAGAG AACTTTCCGT TCTGCACCAT CGAACCCAAC
TCTGGCATAG TGCCTGTACC CGACCCGCGC ATGGATAAAA TATCCGCGCT CGTCAAACCC
CAGCGCGAAC TACCAGCCAC CATGGAATTC GTAGATATCG CAGGCCTCGT AGCCGGCGCA
TCTAAAGGCG AAGGCTTAGG TAACCAGTTC CTCGCCAATA TTCGCGAAAC CGAAGCCATT
GCCCATGTAG TGCGCTGCTT CGACGACCCC AACGTTATTC ACGTTGAAGG CAAAGTAGAC
CCAGCCGCCG ACATAGACAC CATCAACACC GAGCTGGCAC TTGCCGACCT AGACGCAGTG
GAAAAAGCCA TCTTCCGCTA CACCAAGCTA GCCAAAGGCA AAGATGCCCA CGCAGTAGCC
ATTAAAGCCT TGCTAGAAAC GCTATTGCCG CACTTAAACG AAGCCAAGCC ACTGCGCGCC
TTCCCGCTTA CAGACGACCA GCTAAAGCTA CTTAAAGAGC TTTCGCTGCT TACACTTAAG
CCCACCATGT ACATTGCCAA CGTGGAAGAA GACGGCTTCG AAAACAACCC GCTGTTAGAC
AAAGTACGCG AAATAGCCGC AGCAGAAAAC GCCGTAGTAG TGCCAATCTG CAATAAGCTA
GAAGCCGAAA TAGCCGAGCT AGACGACGAA GAAAAAGCTG AGTTCTTAGG TGAGATGGGC
ATGACCGAAC CCGGCCTTAA CCGCGTAATT CGCGCAGGCT ACGAGCTGCT AGGCCTACAA
ACCTACTTCA CCGCCGGCGT AAAAGAAGTA CGCGCCTGGA CCATCCCTGT AGGCGCCACC
GCACCACAAG CAGCCGGCAA GATACACACC GACTTCGAAA AAGGCTTTAT ACGCGCAGAA
ATTATCGGCT ACGACGACTA CATCGCCTGC AAAGGTGAAG CAGGCGCAAA AGAAGCCGGT
AAATGGCGCC TAGAAGGCAA GGAGTACATC GTTAAAGACG GCGATGTGAT TCACTTTAGG
TTTAATGTTT AA
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| Protein sequence | MGFKCGIVGL PNVGKSTLFN ALTSAGIDAE NFPFCTIEPN SGIVPVPDPR MDKISALVKP
QRELPATMEF VDIAGLVAGA SKGEGLGNQF LANIRETEAI AHVVRCFDDP NVIHVEGKVD
PAADIDTINT ELALADLDAV EKAIFRYTKL AKGKDAHAVA IKALLETLLP HLNEAKPLRA
FPLTDDQLKL LKELSLLTLK PTMYIANVEE DGFENNPLLD KVREIAAAEN AVVVPICNKL
EAEIAELDDE EKAEFLGEMG MTEPGLNRVI RAGYELLGLQ TYFTAGVKEV RAWTIPVGAT
APQAAGKIHT DFEKGFIRAE IIGYDDYIAC KGEAGAKEAG KWRLEGKEYI VKDGDVIHFR
FNV
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