| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3256 |
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| Symbol | |
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| ID | 3965746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4154782 |
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| End bp | 4155723 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637922351 |
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| Product | ribose-phosphate diphosphokinase |
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| Protein accession | YP_528723 |
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| Protein GI | 90022896 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
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| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.670875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0151507 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCAGACT TGATGGTTTT TAGTGGCAAC GCCAACCCAG AACTCGCCAA ACGAGTTGTA
GCTCAACTTG GCATTCCTCT TGGCGAAATA ACCGTAGATC AGTTTTCCGA CGGCGAAATA
TCTGTCGAAT TACTCGAAAA TGTTCGCGGC CGCGATGTAT TCGTAATGCA ACCCACCTGC
GCCCCCACCA ACGACAACCT AATGGAATTG TTGGTAATTG TAGATGCCCT ACACCGCGCA
TCTGCCGGTC GCATCACCGC GGTTGTACCT TACTTTGGTT ACGCTCGACA AGATCGCCGT
GTGCGCTCTG CCCGCGTACC TATTACTGCA AAAGTTGTGG CCGATATGAT GGCCACCGTA
GGCGTTGACC GCGTGTTAAC CGTAGACCTA CACGCAGAGC AAATTCAAGG CTTCTTCGAT
GTACCCGTAG ACAACGTGTA CGGCTCGCCC GTACTACTTG CAGACATAGA AGAGCAAGGC
TTCGAAGACC TAGTTGTAGT TTCCCCCGAT ATCGGCGGTG TTGTGCGCGC ACGCGCAGTA
GCAAAACAAC TAGATATAGA CCTAGCCATT ATTGATAAAC GTCGCCCTAA AGCGAATGTT
GCGGAAGTAA TGCACCTAAT AGGTGAAGTA GAAAACCGCA CCTGCTTGCT CGTAGACGAC
ATGGTAGATA CCGCTGGCAC ACTGTGTAAC GCAGCCAAAG CGCTTAAAGA GCGCGGCGCG
AAAAAAGTAA TAGCCTACGC TACCCACCCA GTATTATCTG GCCCAGCTAT TGAACGCTTA
AACGCATCTG AAATGGACGA ACTGGTTATT ACCGACTCCA TTCCACTTTC TGATGCCGCC
AAAGCAAGCC CTAAAATTCG CCAACTAACT CTCTCGCACA TGCTTGCAGA AGCCATGCGC
AGAATTAGCA ACGAAGAATC GCTTAGCGCG ATGTTTAGAT AA
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| Protein sequence | MADLMVFSGN ANPELAKRVV AQLGIPLGEI TVDQFSDGEI SVELLENVRG RDVFVMQPTC
APTNDNLMEL LVIVDALHRA SAGRITAVVP YFGYARQDRR VRSARVPITA KVVADMMATV
GVDRVLTVDL HAEQIQGFFD VPVDNVYGSP VLLADIEEQG FEDLVVVSPD IGGVVRARAV
AKQLDIDLAI IDKRRPKANV AEVMHLIGEV ENRTCLLVDD MVDTAGTLCN AAKALKERGA
KKVIAYATHP VLSGPAIERL NASEMDELVI TDSIPLSDAA KASPKIRQLT LSHMLAEAMR
RISNEESLSA MFR
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