| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3250 |
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| Symbol | |
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| ID | 3965740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4147869 |
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| End bp | 4148735 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637922345 |
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| Product | protein methyltransferase hemK |
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| Protein accession | YP_528717 |
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| Protein GI | 90022890 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2890] Methylase of polypeptide chain release factors |
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| TIGRFAM ID | [TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0880397 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAATAACC CCATCACCAT AAAAGCATGT TTGCAGCAAG CGCAGCTATT GTTAAGTGAT
ATTAGTGATA GCTCGCGCTT GGATGCAGAA GTCCTGCTTG CATTTGTAAT GCAAAAAAAT
CGCACCTGGC TATACACCTG GAGCGATAAA ATCCCTTCCC CAGATCAACT TCAACAATTT
AACCAGCTGG TCTCGCAGCG CCAGCAGGGC ACGCCTATTG CGTACCTAAC TGGTGAAAAA
GAATTTTGGA GCTTACCGTT ACAAGTAAGC CCCGCAACAT TAATTCCGCG CGGCGATACC
GAAATACTGG TAGAAGTAGC GCTAGAGCTT GCGCAAACGC TACAGCAAAA AAATCCGCAA
GAGCATATTC GTATTTTAGA TTTAGGCACA GGCACTGGTG CAATAGCATT AGCCCTCGCC
TCTGAATTGC CCACCGCAAA CATTACCGCC GTAGATAAAA TGCCGCAGGC GGTAGAGCTA
GCAGAAAAAA ATCGCGCAGC CCTCGGATTT AAAAACGTAA CGGTTTTACA CAGCGATTGG
TTTAGCGCAA TAACTTTGCA AAAGTTTCAT GTAATTGTAA GCAACCCACC CTATATAGAC
GAACAAGACC CCCACTTAAA ACAAGGCGAC GTTCGCTTCG AACCCCTAAC CGCCTTAGTT
GCCCCCAACC AAGGGCTAGC CGATATTCAG CATATAGCCG AGCACGCAAA ACAACACTTG
TTACCAAACG GTTTTTTATG TGTAGAGCAT GGCTGGCAGC AGGCGGAGGC TGTGCGGGGT
GTTTTTGAGA AAAACGGTTA TGTGGGGGTG AGGAGTGAGA AGGATAATGG GGGGAATGAT
AGGGTTACGT TGGGGGTTGT GGGGTAG
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| Protein sequence | MNNPITIKAC LQQAQLLLSD ISDSSRLDAE VLLAFVMQKN RTWLYTWSDK IPSPDQLQQF
NQLVSQRQQG TPIAYLTGEK EFWSLPLQVS PATLIPRGDT EILVEVALEL AQTLQQKNPQ
EHIRILDLGT GTGAIALALA SELPTANITA VDKMPQAVEL AEKNRAALGF KNVTVLHSDW
FSAITLQKFH VIVSNPPYID EQDPHLKQGD VRFEPLTALV APNQGLADIQ HIAEHAKQHL
LPNGFLCVEH GWQQAEAVRG VFEKNGYVGV RSEKDNGGND RVTLGVVG
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