| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3234 |
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| Symbol | |
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| ID | 3965707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4120349 |
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| End bp | 4121278 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637922331 |
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| Product | hypothetical protein |
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| Protein accession | YP_528703 |
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| Protein GI | 90022876 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.475662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.284484 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTCAAGG CGCGAGCATG TTGTGTAATA GGGTTTTTGG CGCGTAAAGC ATCCTTTGGC
GGTAGTAATA GGCTGGCAAT ATTGAACAAG CGATTTAGAA ATTCACATAT TAAGTTCTTC
GCATACTATG GCGTTGCAGG GGCGTTATTT GCTGGCACTG CGCAAGTATG GGCGGAGGGT
TTAACGCTTA ATTGTCGTAT AGAACCCTAT GTGCAGGTAG ACGTTTCCAG TGCGGTTGAA
GGTGTTGTAA GCGAAATTAT TGTAGAGAAA AACGATGAGG TCGTAGCGGG CGACATAGTT
GCTAGGCTGG AATCTGGCTT GGAGTCCGCC ACAGTTGATT TGCGCCGTGT GCAGGCCGAA
GTAGAAAGCG ATATTGCGGC GCAGCAGCTA GCCTTGGATT TCGCAGAGCG AGCACTAGTA
AGGGTTAAAG ACCTATACGG TAAAAAAGCC GCGTCGTTTG CCGAGCTAGA TAAAGCAAAA
ACTGAACACG CAATTGCACT ACAAAAACTC GAGCAAGCTA AAGATAGGCG CGAGCAAGCG
CAAATGGAAC ACAAGCGCGC CAGAGCGAAT TTAAGCCGTT ACACCATTAC CAGCCCAATA
AGTGGTGTGG TGGTCGATAG GTATAAAGAA GTGGGTGAAC ACGTAGATAA CGAGCCAATT
ATGCGCTTGG CACAGCTCGA CCCATTACGT GTGGAGGCCT ACGCGCCTGC CAGTATGTAC
GGCAAAATTA AGGAAGGCAT GCAGGCCGAA CTTACCCCAG AGCTAGAAAG AGCGGGTGGA
AAATATAAAG CAGAGGTGAT TCTGGTCGAT AAGGTTATAG ATGGCCCAAG CAATACCTTT
GGTATTCGTT TGTCATTCCC TAATCCAGAC CAAGCATTGC CGAGCGGTTT GCGCTGTACT
ATTGAGTTTC CTACTGTGCG GCCGAATTAG
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| Protein sequence | MLKARACCVI GFLARKASFG GSNRLAILNK RFRNSHIKFF AYYGVAGALF AGTAQVWAEG
LTLNCRIEPY VQVDVSSAVE GVVSEIIVEK NDEVVAGDIV ARLESGLESA TVDLRRVQAE
VESDIAAQQL ALDFAERALV RVKDLYGKKA ASFAELDKAK TEHAIALQKL EQAKDRREQA
QMEHKRARAN LSRYTITSPI SGVVVDRYKE VGEHVDNEPI MRLAQLDPLR VEAYAPASMY
GKIKEGMQAE LTPELERAGG KYKAEVILVD KVIDGPSNTF GIRLSFPNPD QALPSGLRCT
IEFPTVRPN
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