Gene Sde_3229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3229 
Symbol 
ID3965702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand- 
Start bp4102597 
End bp4103190 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content46% 
IMG OID637922326 
Producthypothetical protein 
Protein accessionYP_528698 
Protein GI90022871 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.474421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.780413 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTTA AGCAAGTACG AAAAGCGATA GCGAAAGTTT TTTCAATTGT GTTCTTATCG 
GCTGCGGCAA CCGCGCAAGC TAATGGACCT GCGCCAGGTA ATTATGCAAT CGACGCTTCG 
CACACGAGTG TAGTTTTCGC TGTGGATCAT ATGGGCTATA GCGATGTGTT AGGCCGGTTT 
AATGAGTTAG AAGGCAGTGT GCAGGTAGGT AGTAGCGGGG AGGCAACCAT TAACATGGTA 
ATAAAAGTGG GCAGTATCGA TTCTAATCAC GCAAAGCGCG ATGAGCATTT GCGCAGCCCT 
GATTTTTTTA ACGCACGTCA GTTCCCCGAA ATAAAAATAA CTGGCCCACT TAGCTTTAAG 
CGTTTGAATG GTAAAAGCGA GCTAGTCGCG AAGGTAACGC TACTGGGTAT TACCAAAAAT 
GTGCACTTCG AGCTTGAAGA AGGCAAGCAA GGCAAAGATC CATGGGGTTT AGAGCGAGTG 
GGTTATACCG CTATTGGCAC CCTTAAGCGC AGTGATTTTG GTATGAACTT TATGCAAGGT 
GGCATTGGCG ATGAGGTATT GCTAACCGTA AACCTAGAAG CCATTAAGCA GTAA
 
Protein sequence
MSVKQVRKAI AKVFSIVFLS AAATAQANGP APGNYAIDAS HTSVVFAVDH MGYSDVLGRF 
NELEGSVQVG SSGEATINMV IKVGSIDSNH AKRDEHLRSP DFFNARQFPE IKITGPLSFK 
RLNGKSELVA KVTLLGITKN VHFELEEGKQ GKDPWGLERV GYTAIGTLKR SDFGMNFMQG 
GIGDEVLLTV NLEAIKQ