Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3223 |
Symbol | |
ID | 3965696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 4099163 |
End bp | 4099510 |
Gene Length | 348 bp |
Protein Length | 115 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637922320 |
Product | phosphoribosyl-ATP pyrophosphatase |
Protein accession | YP_528692 |
Protein GI | 90022865 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0140] Phosphoribosyl-ATP pyrophosphohydrolase |
TIGRFAM ID | [TIGR03188] phosphoribosyl-ATP pyrophosphohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGTA CGCTAGATGT TAGTAAAGTA TTGGGCCTGT TAGATCAAGT ACTTGCAGAG CGCAAGGCCT CTGGCGACCC TGAAGCTTCC TATGTGGCCC AGTTACACCA CAAAGGGCTT AACAAAATAC TTGAGAAAGT AGGCGAAGAG GCCACCGAAA CCATTCTAGC CGCGAAAGAC GCGGAGCGAT CTGGCAATAC AGACTTGCTA GTTTGTGAAA CAGCCGACCT GCTATTTCAC GCTATGGTGA TGCTCTCTCA TTTAGGATCA AACACAGACG CAGTAATGGC TGAGCTTGCT CGCCGTTTCG ATCTGTCAGG ATTAGAAGAA AAAGCCTCCC GCAAATAG
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Protein sequence | MTSTLDVSKV LGLLDQVLAE RKASGDPEAS YVAQLHHKGL NKILEKVGEE ATETILAAKD AERSGNTDLL VCETADLLFH AMVMLSHLGS NTDAVMAELA RRFDLSGLEE KASRK
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