Gene Sde_3223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3223 
Symbol 
ID3965696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4099163 
End bp4099510 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content49% 
IMG OID637922320 
Productphosphoribosyl-ATP pyrophosphatase 
Protein accessionYP_528692 
Protein GI90022865 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0140] Phosphoribosyl-ATP pyrophosphohydrolase 
TIGRFAM ID[TIGR03188] phosphoribosyl-ATP pyrophosphohydrolase 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGTA CGCTAGATGT TAGTAAAGTA TTGGGCCTGT TAGATCAAGT ACTTGCAGAG 
CGCAAGGCCT CTGGCGACCC TGAAGCTTCC TATGTGGCCC AGTTACACCA CAAAGGGCTT
AACAAAATAC TTGAGAAAGT AGGCGAAGAG GCCACCGAAA CCATTCTAGC CGCGAAAGAC
GCGGAGCGAT CTGGCAATAC AGACTTGCTA GTTTGTGAAA CAGCCGACCT GCTATTTCAC
GCTATGGTGA TGCTCTCTCA TTTAGGATCA AACACAGACG CAGTAATGGC TGAGCTTGCT
CGCCGTTTCG ATCTGTCAGG ATTAGAAGAA AAAGCCTCCC GCAAATAG
 
Protein sequence
MTSTLDVSKV LGLLDQVLAE RKASGDPEAS YVAQLHHKGL NKILEKVGEE ATETILAAKD 
AERSGNTDLL VCETADLLFH AMVMLSHLGS NTDAVMAELA RRFDLSGLEE KASRK