Gene Sde_3222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3222 
Symbol 
ID3965695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4098777 
End bp4099163 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content48% 
IMG OID637922319 
Productphosphoribosyl-AMP cyclohydrolase 
Protein accessionYP_528691 
Protein GI90022864 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0139] Phosphoribosyl-AMP cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGACT CTACATTTTT AGACGAAATA ACCTGGACAA GCGACGGCCT AGTGCCCGCC 
ATTGCACGCG ATGCCAAAAC CGGCACAGTA TTGATGATGG CGTGGATGAA CCGAGAATCC
CTAAGCCTTA CCGCACAAGA AAACATAGCT GTTTATTGGT CCCGCTCTAG GGGCAAATTG
TGGCGCAAAG GCGAAACCTC GGGCTTTACC CAGCATGTTA AAAGTATTCG GTTAGATTGT
GATGCCGATG TGATAGTGTT GGACGTCGAA CAAATGGGTG GAATTGCGTG TCATACTGGA
CGTGAGTCGT GTTTCTACAG AGAACTTCAA AACGGTAAGT GGGTTGCAAC CGACCCCGTA
CTTAAAGACC CAAAAGAGAT ATATTAA
 
Protein sequence
MTDSTFLDEI TWTSDGLVPA IARDAKTGTV LMMAWMNRES LSLTAQENIA VYWSRSRGKL 
WRKGETSGFT QHVKSIRLDC DADVIVLDVE QMGGIACHTG RESCFYRELQ NGKWVATDPV
LKDPKEIY