| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3221 |
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| Symbol | |
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| ID | 3965694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4097750 |
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| End bp | 4098637 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637922318 |
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| Product | farnesyl-diphosphate synthase |
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| Protein accession | YP_528690 |
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| Protein GI | 90022863 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAG AATTGACCCA CTTTCTTGCC AAGTACCGCG AGCACACTAA CGGTTTGCTA
GAAGAACGCT TAATCGGCCT AAAGCACTAC AACACCGACC TAATAGAAGC CATGCGCTAC
AGCTTATTGC TGGGCGGTAA ACGTGTACGC CCCGTATTAG TGTATGCCGC AGCCTACGCA
ACTGGCGGCA TATCTGCGGC CGCCGACGAT TGCGCCTGCG CAATAGAGGC CATTCACACC
TATAGCCTTA TTCACGACGA TTTACCGGCA ATGGATGACG ACGCATTGCG CCGAGGCCAA
CCCACCTGTC ATATTGCCTA CAGTGAGGCA ACAGCTATAC TCGCGGGTGA CGCGCTACAG
TGCCAAGCTT TTGAATGGCT AGCGAATAGC CAGCACATGC CTGCAAGCGC TGCATTACAG
GCAATTGCCG CACTTGCGAA GGCCTCTGGC GCTAGCGGCA TGGTTTTGGG GCAAGCTATC
GATCTTGCCG CGGTTGATAA AAGCGTAGAT TTGCAACACT TAGAAACCAT GCACCAGCAC
AAAACAGGCG CACTCATCAG CGCAAGCGTA GAAATGGGCG CGATTGCCGC CGGTGCTACC
CCCACCCAAA CCGCGCAATT ACGCCAATAT GCCAGCGCCA TTGGCTTGGC GTTTCAGGTG
CAAGACGACA TACTCGACGT TACCGCCAAT ACAGCCACAT TGGGCAAAGA AGCTGGCGCC
GATGCAGAGC GCAACAAGCC AACTTATGTA TCACTCCTTG GTTTAGATGG CGCCAAACAT
AAGGCGAGCG AACTTTTGCA GCAGGCTTTG GCGTCGATCA AAGATTTTGA CGAGCGAGCG
GATATACTAC GCCAGTTGGC GACATATATT GTGCAGCGCG ACCATTAA
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| Protein sequence | MSTELTHFLA KYREHTNGLL EERLIGLKHY NTDLIEAMRY SLLLGGKRVR PVLVYAAAYA
TGGISAAADD CACAIEAIHT YSLIHDDLPA MDDDALRRGQ PTCHIAYSEA TAILAGDALQ
CQAFEWLANS QHMPASAALQ AIAALAKASG ASGMVLGQAI DLAAVDKSVD LQHLETMHQH
KTGALISASV EMGAIAAGAT PTQTAQLRQY ASAIGLAFQV QDDILDVTAN TATLGKEAGA
DAERNKPTYV SLLGLDGAKH KASELLQQAL ASIKDFDERA DILRQLATYI VQRDH
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