Gene Sde_3217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3217 
Symbol 
ID3965690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4094810 
End bp4095373 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content44% 
IMG OID637922314 
Productmodification methylase HemK 
Protein accessionYP_528686 
Protein GI90022859 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAG AACGGCGACG CTATTTTAGA ATTACCGAAA CGGTAGGCCT TAGCTATACC 
GTTTTAGATG AGTTTGGCCC TGCAGATGTT GCTGGCGATG CGCCCGCGTC TGATATTTTG
GCTCATCTAA CCGAGCAAGA TAAAAAAATA GAAATGGCGT TGTTAGAGGT GGAGAAAGAG
TCCCCTAAAG TTGCTGAATT AGTTTCGCTA TTTAACCAAA AATTAGAGCG TATTGTTAAT
TTGCTCACTA TGGAAGGGCG CTTGTTAGAC CAAATAGCAA TGCGTATTCG CGAAGTAAAT
ATAAGCGCAT GCGGAATTGC TTTTACCAAT GAAGAACATA TTTCTGAGGG GCGCCCATTG
CGACTGGAGC TAACGCTTTA CCCTGAGGAG AAAAAAATAG TGTCAGACGG CCGTGTCGTA
TCCTGCGATC CCGCCCCTGA CGGACGCCAC TTTTATATGC GCGTCGACTT TTATGCTATG
AGTAAAACCG CACAAGAAGA ATTGATTCAA CATATAGTTA AAACCCAGAG TAGCCAGTTG
CAGCAACGGC AAAAAAACAA ATAA
 
Protein sequence
MSEERRRYFR ITETVGLSYT VLDEFGPADV AGDAPASDIL AHLTEQDKKI EMALLEVEKE 
SPKVAELVSL FNQKLERIVN LLTMEGRLLD QIAMRIREVN ISACGIAFTN EEHISEGRPL
RLELTLYPEE KKIVSDGRVV SCDPAPDGRH FYMRVDFYAM SKTAQEELIQ HIVKTQSSQL
QQRQKNK