Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3214 |
Symbol | |
ID | 3965687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4092408 |
End bp | 4093280 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637922311 |
Product | gluconolactonase |
Protein accession | YP_528683 |
Protein GI | 90022856 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACG TCGAAGTCGC TCTGAATGTT CGCGCCAAGT TGGGCGAATG CCCACGTTGG GATGAAAAAG AACAGCTTTT ATATTGGGTG GATATTGATT CCTTCCAATT GCATCGTTTT GACCCTAAAA CGGGTAAAGA TGATTTTATT ACCTTTAAAG AAGAGATTGC CTGCTTTAGC TTGCGCCAGA ACCACGATGG CTTTTTAGTT GCCATGCGCA GCGGGTTTCA TTTTTTAGAT GGCTGGAATA CAAAATTGCG TGCCATTGCA GACCCAGAAG CAACTTTAGT TAAAAACCGC TTTAACGATG GCCGTTGCGA CGCCGAAGGC CGCATGATTG CAGGTTCTGT GTACCCGCCT AAAGATCACG ATGGCGCCAA TTTATGGCAG CTTGGAACCG ACCTTAAAGT AACTAAGCTA GCGGAAGGTT TATTAACATC CAACGGTGCC GGCTTTAGCC CAGATAACAA AACCTTTTAC TTCTCTGATA CGCCAAAGCA CGTTATATAT AAGTACGATT ATGATTTGGC TACTGGGGAA ATGACAAACG GTACTGTTTT TCATCAGTTT CCATTTGGTA ATGGCCGCCC TGATGGCGCA GCCGTAGATA GCGAAGGGTG TTATTGGACC GCACTGTATG AAGGTAGCCG CATAGTGCGA TTAAGCCCAG AAGGCGAAAT TTTGCAGGAA ATAGATTTAC CCGTGCGCTG CCCAACTATG GTGGCGTTTG GTGGTGAAGA CCTGAAAACT CTTTATATAA CAACTGTTGG CGCGCGCCCC GAAGAAGAGC TTAGGGATTA CCCGCTTTCT GGTGCATTGT TAAAAGTCGA AGTGGATGTG CCAGGCTTAG TTGAGCATAG GTTCGCCCTA TAA
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Protein sequence | MKNVEVALNV RAKLGECPRW DEKEQLLYWV DIDSFQLHRF DPKTGKDDFI TFKEEIACFS LRQNHDGFLV AMRSGFHFLD GWNTKLRAIA DPEATLVKNR FNDGRCDAEG RMIAGSVYPP KDHDGANLWQ LGTDLKVTKL AEGLLTSNGA GFSPDNKTFY FSDTPKHVIY KYDYDLATGE MTNGTVFHQF PFGNGRPDGA AVDSEGCYWT ALYEGSRIVR LSPEGEILQE IDLPVRCPTM VAFGGEDLKT LYITTVGARP EEELRDYPLS GALLKVEVDV PGLVEHRFAL
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