| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3213 |
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| Symbol | |
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| ID | 3965686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4091261 |
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| End bp | 4092340 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637922310 |
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| Product | two-component hybrid sensor and regulator |
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| Protein accession | YP_528682 |
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| Protein GI | 90022855 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATAT TACTTATTGA AGACAACCCA GATCACGCAG AGCTTGTGCA AGAAACACTG
CATTCTGCCT ACCCTAAAAA CACAGATATT CACTGGGTAG ATAGACTCTC GCCGGGGTTA
GAAAAGCTTA AGAATAATAA CTACGACTTA TTTCTGTGCG ACTTAAAACT GCCTGACTCC
ACTATAGAAA CCACCGTTTC GGCGCTGCAA AACATACAAA CCTTCACCCC AATAGTGGTA
TTAACTTCGC TCGATGACGA AGGTATAGCC AAATTACTTA TTAATACAGG TGTACAAGAT
TACATTCCGA AAGAAAATTT AGACCCAGAT TTTCTTCAGC GTGTTTGCAA CCATTCCATC
GAACGTAAAA AACAAACTGT AGAGCTTGAA AACCGCAACG CAGACCAAGC CCGCTTTTGT
TTTAGTTTAT GCCACGACTT TAAAGAGCCT ATACGAAAAA TTTCCACCAT GCTCTCTATG
CTACGCACAG ACATAGAACC CAAAATTGAA CTTACAGAAG AAAATCAATG GTGTTTCGAT
TCGGTACAAA AAAACGCAAC ATCACTCATA TCACTTATAG ATGGCCTGTA TGAATATCTA
AGCCTAGAAA GTGGCGAGAT TACGTTTACA TCGATAAATT TAAATCACCT CGTACTGCAA
ATTAAATCCC AATTTTTAGA AGATAATACT ACGGCGAGCA TATCCCATGA TGACCTACCC
GTCATTGAAG GGATAGAGTC ACAAATACTG TTCCTTATTA AAAACATCAT TCACAATGGC
ATAAAGTACA ACGCGCGCGC ACCTCAAATT AACATTCGCC ACGAACTAGA CGCCAATAAG
AAATATTGCC ACTTGTTTAT TCAAGACAAC GGTATTGGCT TGAAAGAAGA GCATTTTGAA
GAAATATTCT CCCCCTTTAA ACGCCTTCAC TCCAAAAGCA AGTACCCTGG CACAGGCCTA
GGGCTAAGTA TTGCAAAACG AGTTGTTGAA AATCACAGAG GAAAAATAAG CATTGAAAGT
GAGCTAGGGC TGGGAACAAC ATTCAAAATC ACGTTGCCAC TCAAACAGAA TATCGTGTAA
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| Protein sequence | MQILLIEDNP DHAELVQETL HSAYPKNTDI HWVDRLSPGL EKLKNNNYDL FLCDLKLPDS
TIETTVSALQ NIQTFTPIVV LTSLDDEGIA KLLINTGVQD YIPKENLDPD FLQRVCNHSI
ERKKQTVELE NRNADQARFC FSLCHDFKEP IRKISTMLSM LRTDIEPKIE LTEENQWCFD
SVQKNATSLI SLIDGLYEYL SLESGEITFT SINLNHLVLQ IKSQFLEDNT TASISHDDLP
VIEGIESQIL FLIKNIIHNG IKYNARAPQI NIRHELDANK KYCHLFIQDN GIGLKEEHFE
EIFSPFKRLH SKSKYPGTGL GLSIAKRVVE NHRGKISIES ELGLGTTFKI TLPLKQNIV
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