| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3209 |
|---|
| Symbol | |
|---|
| ID | 3965682 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 4085115 |
|---|
| End bp | 4086335 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637922306 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_528678 |
|---|
| Protein GI | 90022851 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGATT TTTACCAGAA CGGTATAATT ACAACATTAC ATAATTTAAA ACAGCGCCCA
CTAGAGGCCA TGGAAGACGA ACTGCGAAAA TTTTCCAAAA CTCGCCCTAT GGCCCTCGTT
TTACCTTCGC TATTCTCCGA GCTAGAAGGC GATGCACTGC CCAATATTGT TAACGAACTA
AGTAAAGTAG ATTACCTACA AGAAATAGTT ATTGGCCTAG ATCGCGCAGA CGAAGATCAA
TACCGCCGCG CATTAGAGTT TTTTAAACCG CTCAAACAAA ATTTTAAAGT ACTGTGGAAC
GACGGCCCAC GCCTGCGCGC CATCGACCAA CGCTTAAAAG ACGAAGGCCT AAGCCCTATG
GAAGCCGGCA AAGGACGCAA CGTATGGTTT TGCTTGGGCT ATGTATTGGC AAGCGGCCAA
TCGCAATCGG TAGCTCTGCA CGATTGCGAT ATAGTTACCT ACGATCGCAG CTTACTCGCG
CGCCTTATTT ACCCCGTAGC CAACCCCAGC TTTAACTACG AGTTTTGCAA AGGTTTTTAC
GCCCGCGTTG CCAACGGCAA AATTCACGGC CGCGTTAGCC GCTTATTGGT TACGCCATTA
ATTCGCGCCT TGAAAAAAAC ACTGGGCCAC TACGATTATT TAGATTACAT CGACAGCTTC
CGCTACCCAC TTGCGGGGGA GTTTTCGTTC CGCACCGATG TAATTACCGA CATTCGCATC
CCCAGTGATT GGGGCTTAGA AATAGGCGTG CTTTCGGAGC TTAATCGCAA CTATGCCAAC
AACAGAATAT GCCAAGCAGA TATTGCCGAC ACCTACGATC ACAAGCATCA AGATCTCTCG
GCAGAAGACG CAGAAAAAGG CTTATCCAAA ATGTCTATCG ACATATCAAA AGCCCTATTC
CGCAAGCTTG CCACCAACGG CGTAGTGTTT AACTCAGAAA CATTTCGCTC TATTAAAGCC
ACCTACTTCC GCATAGCGTT AGATTTTGTA GAAACCTATT ACAACGATGC AGTAGTAAAC
GGCCTTAAAT TAGATATTCA CAGCGAAGAA CGCGCAGTAG AATTATTTGC CCGCAATATT
TTAGAAGCCG GCAAGCGCTT TCTTTCCAAC CCAATGGAAA AACCATTTAT TCCCAGCTGG
AACCGCGTTA CCAGTGCAAT ACCCGGCATT TTAGAAGACA TAAATGCAGC GGTAGAAGCC
GATATGGCAG ATTTTCAATA A
|
|---|
| Protein sequence | MGDFYQNGII TTLHNLKQRP LEAMEDELRK FSKTRPMALV LPSLFSELEG DALPNIVNEL
SKVDYLQEIV IGLDRADEDQ YRRALEFFKP LKQNFKVLWN DGPRLRAIDQ RLKDEGLSPM
EAGKGRNVWF CLGYVLASGQ SQSVALHDCD IVTYDRSLLA RLIYPVANPS FNYEFCKGFY
ARVANGKIHG RVSRLLVTPL IRALKKTLGH YDYLDYIDSF RYPLAGEFSF RTDVITDIRI
PSDWGLEIGV LSELNRNYAN NRICQADIAD TYDHKHQDLS AEDAEKGLSK MSIDISKALF
RKLATNGVVF NSETFRSIKA TYFRIALDFV ETYYNDAVVN GLKLDIHSEE RAVELFARNI
LEAGKRFLSN PMEKPFIPSW NRVTSAIPGI LEDINAAVEA DMADFQ
|
|---|
| |