Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3205 |
Symbol | |
ID | 3965678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 4081480 |
End bp | 4082409 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637922302 |
Product | parallel beta-helix repeat-containing protein |
Protein accession | YP_528674 |
Protein GI | 90022847 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAACA TGAAACACAA TACACGCCCT AGAAGGCTTG GGCTTGCTAC TTGCCTAGTG TGCCTACTGC AGATAGCCCT ATATGCAACA GCTCAAGCTG CGCAAGTACA TACTTCAACA CGGTACTCTG TTGTCGACGA TGCGGGTAGC CGTATAGCGC TGGCAGGCCC TGCACAACGT ATTATTAGCT TAGCGCCCCA CACAACCGAA TTACTGTTTG CCGCCGGTGC CGGCGAACAA GTGGTGGGCG TTGTAAGTTA CAGCAACTAC CCAGAGCGAG CACAAACCAT TCAAAACGTT GGCTCGTATC ACCAATTTGA TTTTGAGCAA ATTGCACTGC TTAAACCCGA CTTAATTGTG GGCTGGGCCA GTGGCAACCC CAAACCGCTG CTAGAAAAAC TGCGCACAAT GGGCTTTACC TTATTTTTAA GCGAGCCCAA AGAGCTAGAC GACATAGCAT ATAACATTAT CAAGCTGGGC CAATTAGCGG GCACACAGGC TAACGCAGAA AAAGCCGCTG CCAGCTATCG CCAGCAGCTT GCAGACATTG CCCAACAAAA TAAAAGCAAA AAAAACGTAA CCGTGTTTTA CGAAATATGG CACAGTCCGC TAATGACATT GGGCGGCGAC CATTTATTTA ATAAAGTGCT GGCGCTATGC TCTGCCAGCA ATGTCTTTGC CGACTTAGAC TCACTAGCCC CACAAATTGG GGTAGAAAAC GTACTGCAAC GCAATCCAGA TATGATACTC GCCAGCGGCA TGGATACCTC GCGCCCCGAC TGGCTAGATA AATGGTTAGA ATGGCCGCAA CTTAGCGCTG TTAAAAACAA CCACCTGTAT TTTATTCCAC CCGATTATTT ACAACGCCAC AGCCCGCGCT TAGCCATAGG CGCTAGCCAA CTGTGTGACC ACGTAAATAA AGTTCGATAG
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Protein sequence | MNNMKHNTRP RRLGLATCLV CLLQIALYAT AQAAQVHTST RYSVVDDAGS RIALAGPAQR IISLAPHTTE LLFAAGAGEQ VVGVVSYSNY PERAQTIQNV GSYHQFDFEQ IALLKPDLIV GWASGNPKPL LEKLRTMGFT LFLSEPKELD DIAYNIIKLG QLAGTQANAE KAAASYRQQL ADIAQQNKSK KNVTVFYEIW HSPLMTLGGD HLFNKVLALC SASNVFADLD SLAPQIGVEN VLQRNPDMIL ASGMDTSRPD WLDKWLEWPQ LSAVKNNHLY FIPPDYLQRH SPRLAIGASQ LCDHVNKVR
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