Gene Sde_3202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3202 
Symbol 
ID3965675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4078979 
End bp4079743 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content49% 
IMG OID637922299 
ProductATP-binding ABC transporter protein 
Protein accessionYP_528671 
Protein GI90022844 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATTC AATTACAGTG GCTCGATTTG GCCGTGGGCG GTAAGCAAGT ATGCCGCGGG 
TTAGATTTAG ATTTTAGTCA GGGCAAAGTG TGGGGCGTGC TCGGTCAAAA TGGCATTGGC
AAAACCACGT TACTTCATAC CTTGGCTGGG TTGCGTAAGC CCGATGCTGG CAATGTACTG
GTAGATGGCA TTGATGTGTC GCTATGGTCG CGCAAACGTT TAGCGCAAAA ACTGGGTATA
TTACTGCAAG AAGTGAGCGA TCCTTTTCCG TCCACGGTTT TAGATACCGC CCTTATTGGC
CGCCACCCCT ATTTGGCGCC GTGGCAATTT GAATCTAGCC ACGACGAAAA AATTGCGCTC
GATGCGCTTG CTCAAGTAGA TTTGCTGCCG CTAGTTAAGC GTGATGTAAA TACTCTTTCA
GGCGGCGAGC GACAGCGCTT GGCGCTGGCT ACATTGCTGG TGCAAAACCC CGACATATAC
GTGTTAGATG AACCGAGCAA TCACCTCGAT TTACACTATC AAATTGCACT GCTCGATATT
ATTTGTGCGC AAACACACAG TGAGCAGGGC CGCGTAATAA TGACCCTGCA CGATATTAAT
CTCGCTGTAC GCTATTGCGA TCATTTGATC TTTGTTATGG GCGAGGGCGA AGTGGTGGCG
GGGCCTGCGG AAGAGTTACT AAACGATAAG TACCTGCACC GTCTTTTCAA GCACTGCTTA
GTGGAGTTAC GCAACGGCGA TTATCGCGCG TTTTTACCTG GCTAA
 
Protein sequence
MSIQLQWLDL AVGGKQVCRG LDLDFSQGKV WGVLGQNGIG KTTLLHTLAG LRKPDAGNVL 
VDGIDVSLWS RKRLAQKLGI LLQEVSDPFP STVLDTALIG RHPYLAPWQF ESSHDEKIAL
DALAQVDLLP LVKRDVNTLS GGERQRLALA TLLVQNPDIY VLDEPSNHLD LHYQIALLDI
ICAQTHSEQG RVIMTLHDIN LAVRYCDHLI FVMGEGEVVA GPAEELLNDK YLHRLFKHCL
VELRNGDYRA FLPG