Gene Sde_3201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3201 
Symbol 
ID3965674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4078396 
End bp4078809 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content48% 
IMG OID637922298 
Producthypothetical protein 
Protein accessionYP_528670 
Protein GI90022843 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTATTA TCTCTTCCAA CATTACTATT CCCGCCGATG AAATAGAGCT TAGCGCCATT 
CGTGCACAAG GGGCAGGCGG CCAAAACGTA AACAAAGTTT CCTCGGCTAT TCACCTGCGC
TTTGATATTC GCGCTTCGTC GCTGCCAGAG TTTTATAAAG AGCGTTTACT AGGGCTTAAA
GACTCGCGAA TAAGTAAAGA AGGGGTGCTA ATTATTAAAG CCCAGCAATT TCGCACCCAA
GAGAAAAACC GCGAAGACGC ACTGGCACGC TTAAAAGAAC TCGTGCTGCA GGCCACTACC
TTTCAAAAAG CGCGCAAACC CACCAAGCCT ACCAAGGCCT CTAAAACGCG CAGAATGGAT
GGCAAAACTC AACGCGGCAA AATTAAAGCC ATGCGCGGGA AGGTATTCGA TTAA
 
Protein sequence
MVIISSNITI PADEIELSAI RAQGAGGQNV NKVSSAIHLR FDIRASSLPE FYKERLLGLK 
DSRISKEGVL IIKAQQFRTQ EKNREDALAR LKELVLQATT FQKARKPTKP TKASKTRRMD
GKTQRGKIKA MRGKVFD