| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3200 |
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| Symbol | |
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| ID | 3965673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4076735 |
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| End bp | 4078285 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637922297 |
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| Product | dystroglycan-type cadherin-like |
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| Protein accession | YP_528669 |
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| Protein GI | 90022842 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGCAA TCCTGTATCC TGCGCGCCCT TTAGTTGATG CAGACCCCAA TATGAAATTT
GCCGAACTTG GCCTTTGTCC CGCCATTCAG AAAGCCGTAC TCGAACAAGG CTACGAAACC
CCTACCCCAA TTCAAGCGCA AGCCATTCCC CCTGTATTAG AAGGGCGCGA TGTGATGGCC
GCTGCGCAAA CCGGTACGGG TAAGACGGCG GGGTTTACAT TGCCCATTTT AGAAATACTG
GCAGAAGGCA TAGAAAACGG CCGTAAAGTA AAGCCGAATC AGGCACGTGC GTTAGTACTT
ACTCCTACGC GAGAGCTTGC AGCACAGGTA GGTGAAAACG TTGCCCTATA CGGCAAGTAC
TTGCCTATTA AATCTACCAT CGTATTTGGC GGCGTGAAAA TTAACCCGCA AATGATGAAA
TTGCGCGGCG GTGTCGACAT TTTAGTGGCC ACGCCAGGCC GTTTGATGGA CCTATACAAT
CAGCGTGCAG TGAAGTTTGA TCAGCTAGAA ATGCTGGTGT TGGACGAAGC CGATCGCATG
CTCGATATGG GCTTTATTCA CGATATTCGC AAAATTATGG CTATTTTACC GAAGAAACGT
CAAAACCTGA TGTTTTCGGC GACGTTCTCG CAAGATATTC GCGAATTAGC TAAAAGTATT
GTGAATAACC CAGTAGAAAT TACTGTGAAC CCGCCCAACA GCACCGCAAC CCGCGTAAAA
CAGTGGATTT GCCCCGTTGA TAAAAAAGAA AAGCCCGCTT TGCTTACCCA TTTGATTAAA
ACCAATAAGT GGCAGCAAGT GTTGGTGTTC TCTCGCACCA AGCATGGCGC AAATAAATTA
GTTAAACAAT TGGAAGGCAG TGGCCTGCGA GCAGCGGCGA TTCACGGCAA CAAAAGCCAA
GGCGCACGCA CTAAAGCGTT AGCCGAGTTT AAAAATGGCA CGGTAAAAAT TCTTGTAGCC
ACCGATATTG CCGCTCGCGG TTTGGATATT GATCAACTAC CGCAAGTGGT GAACTTCGAC
TTACCTCAGG TTGCTGAAGA TTACGTGCAT CGAATTGGCC GCACAGGCCG TGCTGGCGCA
GAGGGCAATG CCGTTTCGCT AGTGAGTGCC GACGAATTTC AAATGTTAAA AGAGATTGAG
CGTTTAACTA AAACGTTGCT CACTCGCGAA GTTATTCAAG GCTTTGAGCC AGACCACAAT
TTACCTGAGT CTCGATTAGA TACCCGCCCC ATTCGCCCCA ATAAGCCGAA ACGGCCCAAG
CCAGCAGGTG GTGCTTCGAA CCGCAGTGGC GGTGGTAACA GTGGCGGTGG CAATAATCGC
GCTAAGCCGC GTGGCGATGA CAGCAAAGCG GCCAATGCCG ATACCCCGTG GGCAGGCAAA
GCAAAGCCGC GCAAGCCTCG CCCTGCAGGT GCTAAACCCG CTACACAAGG TAAGCCTGCC
GGCGCGCGCA ATGGCAATAC AGGCCCAAAA GGTAAGGGTG GGCCAGCCGG TGGGGGTGCC
AGACGACCAA CTAATAAGCC TAGCGGTGCA CAAGGGGCTG CTAGAAGTTA G
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| Protein sequence | MAAILYPARP LVDADPNMKF AELGLCPAIQ KAVLEQGYET PTPIQAQAIP PVLEGRDVMA
AAQTGTGKTA GFTLPILEIL AEGIENGRKV KPNQARALVL TPTRELAAQV GENVALYGKY
LPIKSTIVFG GVKINPQMMK LRGGVDILVA TPGRLMDLYN QRAVKFDQLE MLVLDEADRM
LDMGFIHDIR KIMAILPKKR QNLMFSATFS QDIRELAKSI VNNPVEITVN PPNSTATRVK
QWICPVDKKE KPALLTHLIK TNKWQQVLVF SRTKHGANKL VKQLEGSGLR AAAIHGNKSQ
GARTKALAEF KNGTVKILVA TDIAARGLDI DQLPQVVNFD LPQVAEDYVH RIGRTGRAGA
EGNAVSLVSA DEFQMLKEIE RLTKTLLTRE VIQGFEPDHN LPESRLDTRP IRPNKPKRPK
PAGGASNRSG GGNSGGGNNR AKPRGDDSKA ANADTPWAGK AKPRKPRPAG AKPATQGKPA
GARNGNTGPK GKGGPAGGGA RRPTNKPSGA QGAARS
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