| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3194 |
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| Symbol | gatA |
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| ID | 3965647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4070979 |
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| End bp | 4072433 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637922291 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
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| Protein accession | YP_528663 |
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| Protein GI | 90022836 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000437561 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAACT TAACCATTGC CGAGATTATT CAGGGGCTGA AAAACAAGTC GTTTTCCAGC
GTCGAAATTA CCCAGCACTT TTTAAACCGC ATTAAAACGC TGGATACCGA ATACAACAGC
TTTATTACTC TCACCGAAGA GCAGGCCCTA GCTCAAGCAA CGGCCGCCGA CGCGCGCCTA
GCCGCCGGCG ATGCACCCGC GCTTTGCGGC GTGCCCCTTG CCCACAAAGA TATTTTTTGC
ACTAACGGCG TACGCACAAG CTGCGGCTCT AAAATGCTAG ATAACTTTGT ACCGCCCTAC
GACGCGACCG TAGTTACCAA CTACAGCCAA GATGGCGTTG TGATTTTAGG TAAAACCAAC
ATGGATGAGT TCGCTATGGG CTCTTCCAAC GAAACCAGTT ACTACGGGCC AGTTAAAAAC
CCTTGGGATA CCAACTGCGT ACCGGGTGGT TCTTCCGGTG GTTCCGCTGC AGCTGTGGCC
GCGCGCCTTG TGCCCGGCGC CACCGCAACC GACACCGGCG GCTCTATCCG TCAGCCAGCA
GCCCTGTGCG GTATTACCGG CATTAAGCCT ACCTATGGTC GCGTATCGCG CTGGGGCATG
ATTGCTTTCG CATCTAGCCT CGACCAAGCC GGCACAATGA CGCGCACCGC CGAAGATGCA
GCCCTTATGT TGCAATCTAT GGCCAGTTAC GACCGCAAAG ACTCCACCTG TGTCGATCAC
CCCATAGACG ACTACAGCGT CAACCTAAAC GCACCACTCG CGGGTTTAAA AATAGGTATT
CCCAAAGAAT ATTTTGGCGA AGGACTAAAC CCCGGTACCG CAGAAGCAGT GCAAGCTGCA
ATTAAAACCT ACGAAGCAAT GGGCGCAACC GTGCAGGAAG TGTCCCTGCC GCACACCCAC
TTAGCCGTAC CGGCTTACTA TGTAATTGCA CCGGCAGAAT GCTCCGCCAA CCTTTCACGT
TTTGATGGCG TGCGCTACGG CCACCGCTGC GACAACCCGA AAGATTTAGA AGACCTATAC
CGTCGCTCGC GCGGGGAAGG CTTTGGCGAA GAGGTTAAAC GCCGTATTTT GGTTGGCACC
TATGCCCTTT CTGCAGGCTT TTACGATGCT TACTACCGCA AAGCGCAGCA GGTTCGCCGC
TTAATTAAAC AAGATTTCGT CGATGTGTTT AGCCAAGTAG ACGTAATACT AGGCCCCACC
TCGCCATCGC CAGCGTTTGA GTTTGGCTCT AAGGGCAGCG ACCCTGTCGC CATGTATTTA
GAAGATATTT ACACCATTGC CACCAACTTG GCAGGCCTGC CAGGCATGTC AATTCCCTGT
GGGCAAGTGG ACGGCAAACC GGTTGGCTTG CAGCTAATTG GCAATTACTT TGCGGAAGCG
AAATTATTGA ACATTGCGCA CAAGTTTCAA ACCGAAACTG ACTTTCACAC TCAAGCCCCC
GCAGCGATTA AATAA
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| Protein sequence | MHNLTIAEII QGLKNKSFSS VEITQHFLNR IKTLDTEYNS FITLTEEQAL AQATAADARL
AAGDAPALCG VPLAHKDIFC TNGVRTSCGS KMLDNFVPPY DATVVTNYSQ DGVVILGKTN
MDEFAMGSSN ETSYYGPVKN PWDTNCVPGG SSGGSAAAVA ARLVPGATAT DTGGSIRQPA
ALCGITGIKP TYGRVSRWGM IAFASSLDQA GTMTRTAEDA ALMLQSMASY DRKDSTCVDH
PIDDYSVNLN APLAGLKIGI PKEYFGEGLN PGTAEAVQAA IKTYEAMGAT VQEVSLPHTH
LAVPAYYVIA PAECSANLSR FDGVRYGHRC DNPKDLEDLY RRSRGEGFGE EVKRRILVGT
YALSAGFYDA YYRKAQQVRR LIKQDFVDVF SQVDVILGPT SPSPAFEFGS KGSDPVAMYL
EDIYTIATNL AGLPGMSIPC GQVDGKPVGL QLIGNYFAEA KLLNIAHKFQ TETDFHTQAP
AAIK
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