| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3193 |
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| Symbol | |
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| ID | 3965646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4070591 |
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| End bp | 4070872 |
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| Gene Length | 282 bp |
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| Protein Length | 93 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637922290 |
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| Product | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C |
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| Protein accession | YP_528662 |
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| Protein GI | 90022835 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0721] Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit |
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| TIGRFAM ID | [TIGR00135] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00000000642367 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCAGCCTT CAGACATTGA AAAACTGGCC AAGCTCGCCA GGCTAGAAAT AAACGACGAA
ACACTTGGCG AAGTTGCCAA CAGTATTACC GAAGTATTAG CACTGGTAGA CCAGCTTCAA
GCTGCCGACA CCAACGGTGT GGCGCCCATG GCACACCCCT TAGATGCCGT TCAAATTTTG
CGTGCAGATG AAGTTACAGA ACCCAACGTA CGCGAAGAGT TCCAAGCTAT TGCACCAGCA
ACAGAAAACG GCCTTTATTT AGTGCCCAAG GTAATAGAAT AG
|
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| Protein sequence | MQPSDIEKLA KLARLEINDE TLGEVANSIT EVLALVDQLQ AADTNGVAPM AHPLDAVQIL
RADEVTEPNV REEFQAIAPA TENGLYLVPK VIE
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