| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3191 |
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| Symbol | |
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| ID | 3965644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4068402 |
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| End bp | 4069166 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637922288 |
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| Product | rod shape-determining protein MreC |
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| Protein accession | YP_528660 |
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| Protein GI | 90022833 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1792] Cell shape-determining protein |
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| TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0011283 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCGGGTA TTTTTATCTA CACCGATTGG TTTGCGTCCC TCAAAAATCA GGCGACGGAC
GTCGCTGCGC CTTTTTATTG GGTATCTGAT ATCCCTGCCA AAGTAGAAGA TTGGGCCGAT
AACCGCGTTA TGTCGCGCTC GCGACTACAG CAAGAAAACG AATCCCTGCG CACCGAACTG
CTTATTCACA AGCGCAAATT ACAGCAAATG GCATCGCTTG CGGCCGAAAA CGTACGCCTG
CGACAATTGC TTAATTCTGC GGAGATGATC GAAGATAGGG TTATTATCGC CGAACTTATT
GGCGTAAGCC CCGACCCACT GGTACACAAG GTAATTGTTA ACCGCGGCAG TAATCACGGC
GTGTATATCG GCCAACCCCT GCTCGATGCC AATGGCTTAA TGGGCCAAGT GGTGCAGGTG
GGGGCGCTAA GTAGCCAAGT GCTACTTATT ACAGATACAA CCCATGCCTT GCCAGTACAA
ATCAATCGCA CAGGTGTTCG CTTAATTGCA GAAGGGCTGG GCCGGCTGGA TGAACTCGCA
TTGCGCTACG TGCCAAACAC CACCGATATA GAGGTGGGTG ACCTGTTGGT AAGTTCCGGT
TTGGGGCAGC GCTTCCCCGC CGGTTACCCG GTAGCTGAAG TGGTAGAGGT GCAGCGCGAC
CCGGGCAAGG CATTTGCCTC GGTGATGGCC AAGCCAAAAG CGGAGCTAAA CCGCAGCCGC
CATGTGCTAT TGGTGTTTGA TATGCCCCCC TCGGAAGGCC TGTAG
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| Protein sequence | MAGIFIYTDW FASLKNQATD VAAPFYWVSD IPAKVEDWAD NRVMSRSRLQ QENESLRTEL
LIHKRKLQQM ASLAAENVRL RQLLNSAEMI EDRVIIAELI GVSPDPLVHK VIVNRGSNHG
VYIGQPLLDA NGLMGQVVQV GALSSQVLLI TDTTHALPVQ INRTGVRLIA EGLGRLDELA
LRYVPNTTDI EVGDLLVSSG LGQRFPAGYP VAEVVEVQRD PGKAFASVMA KPKAELNRSR
HVLLVFDMPP SEGL
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