| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3187 |
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| Symbol | |
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| ID | 3965640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4061475 |
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| End bp | 4065617 |
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| Gene Length | 4143 bp |
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| Protein Length | 1380 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637922284 |
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| Product | exonuclease VII, small subunit |
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| Protein accession | YP_528656 |
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| Protein GI | 90022829 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3164] Predicted membrane protein |
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| TIGRFAM ID | [TIGR02099] conserved hypothetical protein TIGR02099 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATACCC CAGAAATACA AGAGAGACGA TCGCCCAAGC GCTTAAAGCA AGACTTTATG
CGCATGGTTG TGCGTCGTTT TTGGGGCACG TTGTTTACCA TTATTATTGC CGTGGCTGTA
TGTGTGCAGC TAGGCCGCGA AGCTTTTCCT CTACTTAATG ATTACCGCAC AGAAATAAGC
CGCCAGCTAA GTGGCACGCT GGGTGTCGAT ATAAAAATTG GCGAAGTGGC GGCCAGCTGG
AAAGGGTTAA CTCCCAAGCT CAACCTTATT GATGTAACGG TAAGTAACAA AGACACCGCA
GTCTTTAAAA TCAAACGCGC GAGTGCCGAG CTAAGCCTTT TAGATTCGAT TGCCGATTGG
CGCTTTTCAT GGCGACGAAT TGCATTTGAT CAATTTGAAA CAACATTAAC GCAAGACGAA
GCTGGCCATT GGGGTGTTGC TGGCATCGCT TCTAAACCTT CGGCATCTGG GGAGCCTGGT
TTTAATATAG ACGATCCATT AGATGTCTTT CTTTTTGGTC GTCGCATTGA TATTACCGAC
GTAAAAATAA ACCTAGAGTT TCGCACTGGT CACAATACCC AATTAGTTGT ACCAAAAGTA
AGCTTAGAAA ATGATCGCGA TTTTCATAGG CTATTAGCCG AGCTTAATGT TGATGACGAA
GCAGAAGCCT TTAGTTTAGT GGTAGAAGGT ATTGGCGACC CGCGCAACAA AGAAACCTTT
CATGCAAAAG GCTATATTGC GCTTAATCAA TTTCCTATGG AAAAGGTATT GGCGGCCGTA
GGAGCTGATT TTTGGCAAAG TGATGAAGAG CTGGCGTGGA AAGAGGGGCA TCGATTAGAT
TTATCCGCTT GGTTCGAAGG CAATACAGAA AAGGGAATTA GTTTTAAGGG CATGCTTATT
TCGGATGGCT TGCCTGTTAA ATTGCCAGAA GATGTGCAAT TACCGCAGTT GGTGCAATCG
CGGGTAACCG GTAAGTGGCA TGGGCAAGAG GGGTGGGAAT TTGTTCTACA AAATTTGGGT
ATCCTTTGGG AACACCAGCA AGCACCCGAG CTAGCAGTTA AAATCTACGG CAATCGCGCC
GGCGAAGTTG GGTTTTTAGT TGATGAAATA AACGTAGCCG ATTGGATGCA AACCGCGCAA
GGCATGGGTT TGTATCGCGG TAAGGTTGGC GAAGTTTTAT CGGCGTTAAA CCCGCGCGGC
ACGTTAAAAA ATGTAGATGT ACGCCTGCGC AGTAAAGAGC AGGGCTATTT TCAGTTAAAT
GCAATAGCAG AAGATGCCGC AGTCGATATT TACCAAGGCG TACCGAATTT AGAGCATGTA
AACGGATTTG TAAGTGCCGA CGCCTTCGGT GGTTTCGTAA ATGTTGATAG CCGCGACGGC
TTTGTACTTA ATTTGCCCCG CGTATACGAA AAGCCCATCC TTTTCGATTC CGCGCACGGT
CAGGTTGCTT GGAATATCGA TGTAGAAAAC AAACTCACTT ATATCAACTC TGGTTTACTC
GAAGTTAAAG CAAAAAGCCC CGAGGGAGAT CAAACAGAAA CCGCGCGCGG CTACCTGTTC
CTCAAGCTAC CTTTTACAAA AGATTTAGGC GAAGCAGAAA TGGTGCTCTC GCTGGGGTTA
AATGCATCGA ATGCATCAAG CCATAGGCGC TATGTGCCCA AAGTGGTGCC GCAGGCGTTG
TACCGTTGGT TAGATAAAAG TATTCAAGGC GGAGACATTA AGAATGTAGG CTTTCTTTAC
TCTGGGTCGG TAATGAAAGA TCCCGAAGTG CGGCCTACTA TTCAAGTTTT TGGCGATGTA
GAAAATGCCA CGCTTAAATT CGACCCTGAG TGGCCTGCCT TAGAGAAAAT TAATGCACAC
CTATTTGTCG ATAACGCCGA TTTAACCGTA CAGGTAACCC AGGCAGAAAT GCAGGGCAAT
CACATTAGCG GCGCGGTAAT TGATTTAGTT AAAGCTAAGG ACGGAAAGGG CCATGGCTTG
CGGATAGTGG GAGCCATAAC AGGCAATGCC GCTGCGGCTA TGAAGCTGCT AAACGACAGT
CCGATTCGTG CGGCTATTGG CACTGCTTTT GATCAGTGGC AAGTAGATGG CGATGTATCT
GCGGCAATTA GTTTATTGGT GCCTATAAAT AAAGAATTTG GCGCAGGCTC GCATAAAGTG
AGTGTAGGGT TTGAAAATGC CGATATAGTA ATGCCCGATT TGAACCTGCG AGTGCTCGAT
ATATCTGGTG CCCTCGGGTA CGAATCTGGG CGAGGCGTAT TTAGTGACGG ATTAGCCGGC
AAGGTGTGGG GCAATAAAGT TAATGCCACC ATAAAGAGTG TGGCTAAGGG CGAGAGAGCG
GGCACCCATA TTAAGTTCGA CGGCAAAGTG AATAGCGCAG ATATTCTAAA GTGGACTAGC
CGACCCGAAT TGCATTTTGT TGAGGGTATC TCGCCTGTTT CGGGTTCATT CTATATTCCT
TCCAAAAATA CTCAGCAATA CTCGCTTGAA GTTGCCGTAG CGACAGCGCT AAAAGGTACT
GCCATAACCT TACCTAAACC TCTTGGCAAA CAAAAAGCTG AAGAGAAAAA GTTAGCTATA
AATATAAAAA TATTCCCAGA TAGGCAAGAG TATAAATTTG ACTTTGAAGA GTGGGTTGCT
TTTGATTTTA CTCGTAACAA TACTGGCCTA GAGGGTATGA GGCTTTCGTT TGCTGAGCCG
CGCAAACCAA TATCGGCCGG CTTCTTCGAT GTGAGCGGCA AGGTTAATGA GTTTGATTTA
GAAGCGTGGA ATGAGGCTAA GAACGATTAT TTTAATTATC TTTCGCAAGT AGACGTTGCT
GAAGGTAATT CGCACAGTAG CGCAGAGAGC TTTATGCCTG TGCGCATGGA TTTAGCGGTA
GATACTTGTA CCTTGGGTGG CTTAGATATC ACTGACCTGC GTGTTACAGG GCTTGGTTCA
TCGGATAAAT GGCGCTTGCA TTTAGATAGT GATTTTTTGC GCGGCCAGGT AACAGTATTT
AACAGCGATA AGCCGGTAAC TATGGATTTA GATTACTTGC ACTTCCCTGT GTTAGAAGAT
GTTGCCGAGC AAGGCGCTGA GCCTGAGTCC GAGCTAAACA CCGAAGAGCA GGCGTCGCGT
GAAAGTGTGC TCGCCGATAT AGATTTATCG CGCGCAATTG CTATTGATTT TGTTACCCGT
GATTTTGCCT TGGGTGATGC AAGTTACGGT GCGTGGCAAT TTGAATTGCG ACCTGTAGAG
CACGGCATTG AATTAAATAA TATTCGCGCT GATGTGCGCG GTATGTCGCT GGTAAGTTTG
GCGCAAAAAG TTGACGATGT GCAAACACTG GTTTCCGCTA ACAATGTGAA CACAGCTGGC
AACCAAGCTG TAGGCGAAGC AGAGCCTACA AGGGAAGGTG CGCGTTTTAT TTGGTTGCAA
AATGCGCAGG GGCAGCAAAG CTTTTTCGAT GGGCAGATTC GCGCGAACAA TATTGCCGAT
GTGTTGGCTG CCTGGGGGCA AGAGAAAATG TTTAATAGCG AATCGGTTGT GCTTAACCTT
CGCACCCAGT GGGATGGTGC CCCCGATCAG GTTACGCTAG GTAGCGTACA AGGGTTAATT
TCTTTTGATA TGCGCAACGG CAATTTTATT CGCGGTGCGG AAGCAGGGGA AAACCCCCTG
TTAAGATTAT TGGCGCTTTT TAATTTTGAT ACCATAGCGC GTCGGTTACA GCTAGACTTT
TCCGACTTGG CCAAGCAGGG TTTTGCCTAC GACCGTGTGT ACGGCGAGCT AGACTTTGCC
AATGGCGAAA TTGTTTTAGA AACGCCTCTC GTGGTTGAGT CTACATCGTC GAAAGTACAG
TGGGCGGGTA CCATTAATAT GCTCGATGAA ACTCTCGATA CAGAAATGGT AGTAACCTTA
CCAGTAGCAG GTAATTTAGC GGTTGCTACG GCTTTTGTGA TGGGCTTGCC AGCTGGCTTA
GGTGTGTATG TAGTGGGCAA ACTATTTAAG AAGCAAGTTG ATAAGGTGTC TAGTATTAAC
TACGGCGTAA CCGGCGATTG GGAAGATCCA AAAATTAAAG TGCGACGTAT ATTTAACGAT
TCGGCTGCAA AAAATAAAGG CCAAAGTGTT AAAAAAGAGG CTGCGTCGGA GTCGACTAAC
TGA
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| Protein sequence | MNTPEIQERR SPKRLKQDFM RMVVRRFWGT LFTIIIAVAV CVQLGREAFP LLNDYRTEIS
RQLSGTLGVD IKIGEVAASW KGLTPKLNLI DVTVSNKDTA VFKIKRASAE LSLLDSIADW
RFSWRRIAFD QFETTLTQDE AGHWGVAGIA SKPSASGEPG FNIDDPLDVF LFGRRIDITD
VKINLEFRTG HNTQLVVPKV SLENDRDFHR LLAELNVDDE AEAFSLVVEG IGDPRNKETF
HAKGYIALNQ FPMEKVLAAV GADFWQSDEE LAWKEGHRLD LSAWFEGNTE KGISFKGMLI
SDGLPVKLPE DVQLPQLVQS RVTGKWHGQE GWEFVLQNLG ILWEHQQAPE LAVKIYGNRA
GEVGFLVDEI NVADWMQTAQ GMGLYRGKVG EVLSALNPRG TLKNVDVRLR SKEQGYFQLN
AIAEDAAVDI YQGVPNLEHV NGFVSADAFG GFVNVDSRDG FVLNLPRVYE KPILFDSAHG
QVAWNIDVEN KLTYINSGLL EVKAKSPEGD QTETARGYLF LKLPFTKDLG EAEMVLSLGL
NASNASSHRR YVPKVVPQAL YRWLDKSIQG GDIKNVGFLY SGSVMKDPEV RPTIQVFGDV
ENATLKFDPE WPALEKINAH LFVDNADLTV QVTQAEMQGN HISGAVIDLV KAKDGKGHGL
RIVGAITGNA AAAMKLLNDS PIRAAIGTAF DQWQVDGDVS AAISLLVPIN KEFGAGSHKV
SVGFENADIV MPDLNLRVLD ISGALGYESG RGVFSDGLAG KVWGNKVNAT IKSVAKGERA
GTHIKFDGKV NSADILKWTS RPELHFVEGI SPVSGSFYIP SKNTQQYSLE VAVATALKGT
AITLPKPLGK QKAEEKKLAI NIKIFPDRQE YKFDFEEWVA FDFTRNNTGL EGMRLSFAEP
RKPISAGFFD VSGKVNEFDL EAWNEAKNDY FNYLSQVDVA EGNSHSSAES FMPVRMDLAV
DTCTLGGLDI TDLRVTGLGS SDKWRLHLDS DFLRGQVTVF NSDKPVTMDL DYLHFPVLED
VAEQGAEPES ELNTEEQASR ESVLADIDLS RAIAIDFVTR DFALGDASYG AWQFELRPVE
HGIELNNIRA DVRGMSLVSL AQKVDDVQTL VSANNVNTAG NQAVGEAEPT REGARFIWLQ
NAQGQQSFFD GQIRANNIAD VLAAWGQEKM FNSESVVLNL RTQWDGAPDQ VTLGSVQGLI
SFDMRNGNFI RGAEAGENPL LRLLALFNFD TIARRLQLDF SDLAKQGFAY DRVYGELDFA
NGEIVLETPL VVESTSSKVQ WAGTINMLDE TLDTEMVVTL PVAGNLAVAT AFVMGLPAGL
GVYVVGKLFK KQVDKVSSIN YGVTGDWEDP KIKVRRIFND SAAKNKGQSV KKEAASESTN
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