| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3185 |
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| Symbol | |
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| ID | 3965638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4059931 |
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| End bp | 4060506 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637922282 |
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| Product | protein-methionine-S-oxide reductase |
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| Protein accession | YP_528654 |
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| Protein GI | 90022827 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
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| TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0351258 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTAAAT CGATTGGCAC ACTGCTAGCA GTAAGTAGCG TGGTGGCGAT AGCAGCAGTG
TTTAGTCAGG TAGGGCTGGT TTCGCAGACG ATAGCAGACG AAATTAATGC CGAACCAGAT
ATGAGCATGA CTGTTGCACA GGCGCAACAG TTGGTGGCGC GCGGCGAAAA TCTTACTTCC
ATTCCCAAGC ATATATGGCG CCAGCTGTTA ACCAAGCACG AATACAATAT TATGTGGGAG
AAAGGCACCG AGCGTGCTTT TACTGGCGAT TTACTCGAGG TGCAACAGCC AGGTGTTTTT
GTAACCGCCG GCTGTAAATT ACCTGTATTT AAAACCGAAC ATAAATTTAA ATCGGGCACC
GGCTGGCCGA GCTTTTGGGA TGTGGTAGAT AAAAACAATA TAATTTTAAA AGATGATAGC
AGCTGGGGAA TGCGGCGGAT AGAAGTGTTA TCTGCTTGCG GCGAGCACTT AGGGCACGTA
TTTGACGACG GCCCAGAGCC AACCGGTTTG CGCTATTGTA TTAACTCTGC AGCACTAGAT
TTTATTGCTG CCGACACCGC AGAGCCAGAA GAGTAG
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| Protein sequence | MAKSIGTLLA VSSVVAIAAV FSQVGLVSQT IADEINAEPD MSMTVAQAQQ LVARGENLTS
IPKHIWRQLL TKHEYNIMWE KGTERAFTGD LLEVQQPGVF VTAGCKLPVF KTEHKFKSGT
GWPSFWDVVD KNNIILKDDS SWGMRRIEVL SACGEHLGHV FDDGPEPTGL RYCINSAALD
FIAADTAEPE E
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