| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3178 |
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| Symbol | |
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| ID | 3965612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4053233 |
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| End bp | 4053958 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637922275 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_528647 |
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| Protein GI | 90022820 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAAAGT TAGAAGCACT CCACTTAGCC AAAAGCTACA AAGGCCGCAA AGTCGTTATA
GATGTATCCA TGAGCGTGGA GGACGGCCAA GTTGTGGGGC TGCTAGGCCC AAACGGCGCA
GGTAAAACCA CCTGTTTCTA CATGATTGCA GGCATTGTGC AAGCCGATAA AGGCAGCGTA
CATATTAACG GCAAAGATGT GAGCCGCCTG CCGATGCATG GTCGTGCACG CGCTGGACTA
GGCTACCTGC CGCAGGAAGC CTCTGTGTTT CGCAAGCTAA CTGTAAGCGA AAATATTCTC
GCCATTTTAG AGACACGCAG CGACCTTAAT CGCAAACAGC GCCTCGAACA GCTCGAGCGC
CTGCTAGGTG AATTTCATAT CAACCATATT AAAAACAGCT TGGGCATGGC GCTTTCTGGC
GGCGAACGCC GTCGTGTAGA AATAGCGCGC GCACTGGCCA CAGACCCAGC ATTTATTCTG
CTAGACGAAC CCTTTGCAGG GGTAGACCCC ATATCGGTGA GCGACATCAA AGATATTATC
CGCCACCTTA AAGCACGCGG TATTGGCGTA CTTATTACCG ACCACAATGT GCGCGAAACG
CTGGATATAT GTGAAAAAGC CTATATAGTA TCGGAAGGCC ACATTATTGC CGAAGGCGAT
GCGGCCACCG TACTTAATAA CAAAAAAGTA CGCGAAGTTT ATTTGGGGCA ACATTTTACC
CTCTAG
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| Protein sequence | MPKLEALHLA KSYKGRKVVI DVSMSVEDGQ VVGLLGPNGA GKTTCFYMIA GIVQADKGSV
HINGKDVSRL PMHGRARAGL GYLPQEASVF RKLTVSENIL AILETRSDLN RKQRLEQLER
LLGEFHINHI KNSLGMALSG GERRRVEIAR ALATDPAFIL LDEPFAGVDP ISVSDIKDII
RHLKARGIGV LITDHNVRET LDICEKAYIV SEGHIIAEGD AATVLNNKKV REVYLGQHFT
L
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